Helicobacter cetorum MIT 99-5656: HCD_05135
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Entry
HCD_05135 CDS
T02033
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcm03032
]
HCD_05135
03400 DNA repair and recombination proteins [BR:
hcm03400
]
HCD_05135
Enzymes [BR:
hcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCD_05135
DNA replication proteins [BR:
hcm03032
]
Prokaryotic type
DNA Topoisomerases
HCD_05135
DNA repair and recombination proteins [BR:
hcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCD_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AFI06029
UniProt:
I0ESW0
LinkDB
All DBs
Position
complement(1073508..1075994)
Genome browser
AA seq
828 aa
AA seq
DB search
MQDSLIEKDKNIIEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMNELG
LTSKVAYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAELNEILEFVEGPDFPTGGIIYGKVGIIEAYKTG
RGRVKVRAKVHVEKTKNKDIIVLDEMPYQTNKAKLVEQISDLVRDKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLHLFLSHR
KTIVIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSESPEVAKNALMERFSLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSETRLNEVVKTELLEVKEQ
FSSKRRTEIQESYENIDIEDLIANEPMVVSMSHKGYVKRVDLKVYERQNRGGKGKLSGST
YEDDFIESFFVANTHDILLFITNKGQLYHLKVYKIPEASRTAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIKAINLDEDDELVTAKIVDKN
SKHLLIASHSGTFIKFPLEDVREIGRVGRGVRGIRLAENDFVVGAVVIYDDNNKLLSVSE
NGLGKQTLAESYREQSRGGKGVIGMKLTKKTGNLVGIISVDDENLDLMILTASAKMIRVS
IKDIRETGRNASGVKLIDTADKVVYVNSCPKEEEPENLENSPKQNLFD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagcttgattgagaaagacaaaaatattatagaagtaggaattgattcttct
attgaagagagttatttagcttattccatgagcgtcatcattgggcgtgccttacctgat
gctagagatggcttaaagcccgttcataggcgtattttatatgcgatgaatgagctaggt
ctcacttctaaagtcgcttacaaaaagagtgctaggattgtgggtgatgttattggtaaa
taccacccccatggcgatactgccgtttatgatgccctagttagaatggcacaagatttt
tctatgcgtttagaattagtagatgggcaaggaaactttggctctattgatggcgataat
gccgctgctatgcgttataccgaagctcgcatgacaaaagcgagtgaagaaattttaaga
gatattgacaaagacaccatagattttgtgcctaactatgatgacaccttaaaagagcct
gatattttaccaagccgtctgcctaatctcttagtcaatggggctaatggtattgcagta
ggtatggctacttctataccgccgcatagaattgatgaaatcatagacgctttagtgcat
gtgctagaaaaccctaacgctgaattgaatgaaatcttagaatttgttgaagggccagat
ttcccaactggaggaatcatctatggtaaggtgggtattattgaggcttataaaacaggg
cgagggcgtgtgaaagttagagccaaagtgcatgtagaaaagactaagaataaagacatc
attgttttagatgaaatgccctatcaaaccaataaagccaaattagtagaacaaatcagc
gatttagtgcgagacaaacaaattgagggcattagtgaagtgcgtgatgaatctgataga
gagggcattagagtggtgattgagttaaaaagagatgcgatgagtgaaattgtcttaaac
catctctacaagctcaccactatggagaccacctttagcattatcttgctcgccatttat
aataaagaacctaagattttcacacttttagaactcttacaccttttcttaagccataga
aaaaccatagtcattagacgcaccatatttgaattagaaaaggccaaagcacgagctcat
attttagaaggttacttaatagcattagataatattgatgaaatcgtgcaactcattaaa
acaagtgagagccccgaagtagctaaaaacgctttaatggagcgttttagtttgagtgaa
attcaaagcaaagccatattggaaatgcgtttgcaacgcttaaccggcctagagagagat
aaaatcaaagaagagtatcaaaacttgctagaactcattgatgatttaaatggcatttta
aagagtgaaactcgcttaaatgaagtcgtaaaaacagagcttttagaagttaaagagcag
ttttcttccaaaagacgcactgaaattcaagaatcttatgaaaatattgatatagaagat
ttaatcgctaatgagcctatggtggtgagcatgagccataaaggctatgttaaaagagtg
gatttaaaagtctatgagaggcaaaatcgtggcggtaagggcaagctatctggcagcact
tatgaagatgattttattgagagcttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaaggtcagttgtatcatttgaaagtctataaaatcccagaagcaagtaga
accgctatgggtaaagctatagttaacttaatctcactagcccctgatgaaaagattatg
gcaactttaagcaccaaagactttagcgatgaacgctcactagcttttttcactaaaaat
ggtgtcgtaaaacgcacgaatttaagcgaatttggtagcaatagaagttatagcggtatc
aaagcgattaatttagatgaagatgatgaattagtaaccgcaaaaattgtggataaaaat
tctaagcatttactcattgcctcacattctggcacttttattaagttccctttagaagat
gtgagagaaatcgggcgagttggtcgtggggttaggggcataagacttgctgaaaatgat
tttgttgtgggtgcagtcgttatctatgatgacaataacaagcttttgagcgtgagtgaa
aatgggctaggcaagcaaaccttagcagagtcttatagagaacaatctcgtgggggtaag
ggcgtgattggcatgaaactcactaaaaaaaccggcaatttagtaggcattatcagcgta
gatgatgaaaacctagatttgatgatactcactgcaagtgcgaaaatgattagagtttct
atcaaagatattagagagaccggaagaaatgctagtggggtgaaactcatagacaccgct
gataaagtcgtgtatgtcaattcttgccccaaagaagaagagccagaaaatttagaaaac
tctcctaagcaaaatttgtttgactaa
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