Helicobacter cetorum MIT 99-5656: HCD_05865
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Entry
HCD_05865 CDS
T02033
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Pathway
hcm00220
Arginine biosynthesis
hcm00240
Pyrimidine metabolism
hcm00250
Alanine, aspartate and glutamate metabolism
hcm01100
Metabolic pathways
hcm01110
Biosynthesis of secondary metabolites
hcm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HCD_05865 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HCD_05865 (carB)
00220 Arginine biosynthesis
HCD_05865 (carB)
Enzymes [BR:
hcm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HCD_05865 (carB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATP-grasp_4
Dala_Dala_lig_C
ATPgrasp_Ter
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
AFI06175
UniProt:
I0ETA6
LinkDB
All DBs
Position
complement(1248619..1251873)
Genome browser
AA seq
1084 aa
AA seq
DB search
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEF
SHRTYIQPITPENIAEIIKNEKIDAILPTMGGQTALNVVLEMHERGMLEGVELLGAKIDA
IKKGEDRQAFKEAMLKIGMDLPRGRYAYTELEALEAIKEIGFPAIIRASFTLAGGGSGVA
YNIEEFQELAKSALEASPISEILIEESLLGWKEYEMEVIRDSKDNCIIVCCIENIDPMGV
HTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNP
RVSRSSALASKATGFPIAKVATMLAVGFSLDEIKNDITNTPASFEPSLDYIVVKIPRFAF
EKFAGVSSTLGTSMKSIGEVMGIGGNFLEALQKALCSLENNWLGFESLSKDLESIKKEIR
RPNFKRLLYIADAFRLKVSVDEVFELCRIDKWFLHQIQKLVEVEESINSSVLTNALKLRE
LKNLGFSDVRIATKIKENECLEVSPFEVELARKTLQITPNFEEVDTCAAEFLSLTPYLYS
TYAPNALKLASIQKNREKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIQSVMLNCN
PETVSTDYDTSDTLYFEPIHFECVKAIIERELVDGIIVHFGGQTPLKLAKDLAKMQAPII
GTPFKVIDIAEDREKFSLFLKELNIKQPENGMAKSIDEAYSIANLIGFPIIVRPSYVLGG
QYMRTLENIEELRHYLENVTHSLEISPKNPLLIDKFLEKAIELDVDAICDKKDVYIAGIL
QHIEEAGIHSGDSACFIPSTLSSKILDEIEQTTAKIAIHLGVVGLLNIQFAVYNDSLYLI
EVNPRASRTVPFLSKALGIPLAKVATRVMVLEDLQEALKFYDKKGIVEYSKGVYKPKMPN
FVALKEAVFPFNKLYGADLILGPEMKSTGEVMGIASSLGQAFFKAQMACFNPIQNKGLIF
VSIKDKDKEKACDLLKRLVKLGFELCATEGTHKALEKAGVKSLKVLKISEGRPNIIDLMM
NGEISMAINTSDNKSQGDAKLIRTSVLKNHVSYFTTLSAIEVLLLALEKGSKEDKLLALQ
DYLE
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgatatttctaatattctacttataggttcaggccctattgtgatt
ggacaagcttgtgagtttgattactcagggactcaaagttgcaagaccttaaaatcctta
ggctatagagttatcttaatcaattccaatccagccaccgtgatgactgaccctgaattt
tcacacagaacttacattcagcccattaccccagaaaatatcgcagaaattattaaaaat
gaaaaaattgatgccattttacccacgatgggcggacaaaccgctttaaatgtggtctta
gaaatgcatgaaaggggcatgttagagggcgtagagcttttaggggctaagattgatgcg
attaaaaaaggcgaagacaggcaagccttcaaagaggctatgctaaaaattggcatggac
ttgcctagggggcgttatgcctacacagaattagaggccttagaggcgattaaagaaatt
ggttttccagctattattagagcgagtttcactctagcaggcggagggagtggggtagct
tataatattgaagagtttcaagagttagctaagagtgccttagaagcatcgcctattagt
gaaattttgattgaagagtccttgctagggtggaaagaatatgaaatggaggtcatacga
gacagcaaggataattgtattattgtgtgctgtattgaaaatattgaccctatgggcgtt
cataccggcgatagcataacgattgctcctagtctcaccctaacagataaagaataccaa
cgcatgcgagatgcaagctttgcgattttaagagagattggtgtagataccggcggaagt
aatgtgcaatttgctatccatccagaaactttaagaatggttgtgattgaaatgaatcca
cgagtgagtcgtagctctgctttagcatcaaaagcaaccggctttcctatcgcaaaagtc
gcaaccatgcttgcagtgggctttagcctagatgaaatcaaaaatgatattaccaacact
ccagcgagttttgagcctagtttggattatatcgtagtcaaaattcctcgctttgcgttt
gaaaaatttgccggcgtttcaagcactctaggaacttctatgaaaagcattggcgaagtg
atgggaatagggggaaatttcttagaggctttgcaaaaggcgttatgctctttagaaaat
aattggctagggtttgaatccttaagcaaggacttagagagcattaaaaaagaaatccgc
cgaccaaatttcaagcgattgctttatatcgctgatgcgtttagattgaaagtttctgtt
gatgaagtttttgaattgtgtcggattgataagtggtttttacaccaaattcagaagtta
gtagaagtagaagaaagcattaattctagcgttttaacgaatgctttaaaattgagagag
cttaaaaacttaggttttagcgatgttagaattgcaactaaaatcaaagaaaatgaatgt
ttggaagttagcccttttgaagtggaattagctagaaaaaccttacaaattacccctaat
tttgaagaagtggatacttgtgcagcggagtttttatcgcttacgccttatttgtattct
acctatgcccctaatgctttaaaactagcatccattcaaaaaaatagagaaaagaaaatt
ctcatcataggttctgggcctaatcgcattggtcaaggcattgagtttgattattgctgt
gtgcatgcaagctttgctctaaaagatttaaacattcaaagtgtcatgcttaattgtaat
ccagaaaccgtaagcactgattatgatacaagtgatacactctattttgaacccattcac
tttgagtgcgtgaaagcgattatagaaagagagcttgtagatggcattatcgtgcatttt
gggggacaaacacccctaaaactcgctaaagatttagctaaaatgcaagcccctattatt
ggcacgccttttaaagtgattgatattgcagaagatagagaaaaattttcactcttttta
aaagagcttaatatcaaacagcctgaaaatggcatggcaaagagtattgatgaagcctat
agcattgctaatttgattggttttcctattattgtgcgtcctagttatgtgctagggggg
caatatatgcgaactttagaaaatattgaagagttacgccattatttagaaaatgttacg
cattctttagagattagccctaaaaatccgcttttaattgataagtttttggaaaaggcg
attgagttagatgtagatgccatttgtgataaaaaagatgtctatattgcgggcatttta
cagcatattgaagaggcgggcattcattcaggcgattcagcatgctttatcccttcaact
ctaagttctaagattttagatgagattgagcaaacgaccgcaaaaatcgctattcattta
ggcgtagtagggctattaaatattcagtttgctgtttataatgattcgctttatttgatt
gaagttaatcctagggcaagtagaacggtgccgtttttaagcaaggctttaggcattcct
ttggctaaagtggctactagggttatggtgttagaagacttacaagaagcccttaaattt
tatgataaaaagggtattgtggagtattctaagggagtttataaacctaaaatgccaaat
tttgtggctttaaaagaagcagtttttccttttaataaactctatggagcggatttaatt
ctagggcctgagatgaaaagcacaggcgaagttatgggaattgcgagttctttggggcag
gcatttttcaaggctcaaatggcttgttttaaccctattcaaaacaaggggcttattttt
gtttccataaaagataaggataaagaaaaagcatgcgatttattgaaacgcttagttaaa
ttaggctttgaattatgtgctacagaaggcacgcataaagccttagaaaaagccggagta
aagtctttaaaagtgcttaaaatctcagaaggtcgccctaatattatagacttaatgatg
aatggagaaatcagcatggcgattaatacgagtgataataaatctcaaggcgatgccaaa
cttatccgcacttctgtgcttaaaaaccatgtgagttatttcaccactttaagtgcaata
gaggtcttgctcttagcgttagaaaaaggttctaaagaagacaagttgctagccctgcaa
gattatttagaataa
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