Helicobacter cetorum MIT 99-5656: HCD_06095
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Entry
HCD_06095 CDS
T02033
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
hcm
Helicobacter cetorum MIT 99-5656
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HCD_06095
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
RuvB_N
AAA
AAA_assoc_2
AAA_14
AAA_5
AAA_16
AAA_22
AAA_2
nSTAND3
RNA_helicase
Viral_helicase1
ATPase_2
AAA_18
AAA_17
Sigma54_activ_2
NPHP3_N
Parvo_NS1
NACHT
Mg_chelatase
AAA_24
FNIP_M
AAA_28
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AFI06221
UniProt:
I0ETF2
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All DBs
Position
1303812..1304990
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AA seq
392 aa
AA seq
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MSLTSLLNPKSLEDFLGQEHLIGRDTPLFKALRSKHFPHAFFYGPPGVGKTSLAQIIAHT
LERPILSFNATDFKLDDLRLKLKNYQNALLKPIVFIDETHRLNKTQQEFLLPIMEKDFAL
ILGASTQDPNYSLSHAIRSRSFIFELTPLKNSELEKLCSKALKLLDKQIEPSAKVYLLNN
SAGDARALLNLLDLSAKIENPITLETLKSLRPHSLNDGACSDDTHYNLISALIKSLRGSD
ENASLYYLARLIAGGENPEFIARRLVIFASEDIGNANPNALNLATSCLFSVKQIGYPEAR
IILSQCVIYLACSPKSNTAYKAINKALDCIKKGGLYPIPKHLLPNAKDYLYPHDYNGYVK
QDYLEKPLEFVCSQGIGFEKTLKEWLEKIKSV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgacttctcttttaaacccaaaaagcctagaagattttttagggcaagagcat
ttaataggaagagatacccccctatttaaagccttacgctcaaaacactttccgcatgcc
tttttctatggcccaccaggcgtgggtaaaacaagcttggctcaaatcatcgctcacact
ttagaacgccctattctctcgtttaatgcgaccgattttaagcttgatgatttgcgtctt
aaactcaaaaattaccaaaatgcccttttaaaaccgattgtttttattgatgaaacccac
agattgaataaaacccagcaagaatttttactccccattatggagaaagattttgctctc
atcttaggggctagcacacaagaccctaactacagcctaagccatgccattcgttcaaga
agtttcatttttgaattaacccccctaaaaaatagcgaattagaaaaactttgctctaaa
gccttaaaattgctagacaaacaaatagaacctagcgctaaagtttatcttttaaataac
agtgccggtgatgctagagcgttattgaatctcttagatttgagtgccaaaatagaaaat
cctatcactttagaaaccctaaaatccttacgcccccatagtctaaatgacggagcctgc
agcgatgatacccattataatcttatcagtgcgttaatcaagtctttaaggggaagcgat
gaaaacgcttctttatactatctagcacgcctaattgctggcggagaaaatcctgaattt
atcgcaagaaggcttgttatttttgcgagtgaagacataggcaacgctaatccaaacgcc
cttaatctagccacttcatgcttattttcagtcaaacaaatcggctatccagaagctcgc
attattttgagtcaatgcgtgatttatttggcttgttcgcctaagtctaacacggcttat
aaagccataaacaaagccctagattgtattaaaaaaggggggctttatcctattcctaag
cacctactacctaatgccaaagattatctttacccacacgattataatggctatgtgaaa
caagactatttagaaaaacccttagaatttgtttgttctcaaggcatagggtttgaaaaa
accttgaaagaatggttagagaaaataaagtctgtttga
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