Helicobacter cetorum MIT 99-5656: HCD_06435
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Entry
HCD_06435 CDS
T02033
Name
(GenBank) hemolysin
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcm03009
]
HCD_06435
Enzymes [BR:
hcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HCD_06435
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HCD_06435
Ribosome biogenesis [BR:
hcm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HCD_06435
23S rRNA modification factors
HCD_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
PrmA
Methyltransf_25
DUF3660
ThiS
Motif
Other DBs
NCBI-ProteinID:
AFI06289
UniProt:
I0ETM0
LinkDB
All DBs
Position
1364211..1364918
Genome browser
AA seq
235 aa
AA seq
DB search
MRLDYALFNQNLVNSREKAKALILKKQVLVNKVVISKPSFMIKDNDEIELIAKNLFVSRA
GEKLGAFLETHSIDFKDKIILDVGASKGGFSEVSLLKGAKKVLCVDVGKMQLDESLKDNK
RIECYEECDIRAFKTLEKIDLLLCDVSFISLYCILEAILALSSEFLVLFKPQFEVGRNVK
RNKKGVVMDTKAIFNALENFKNHLRTQNMQVLNIQESLVKGKNGNVEFFIHFKRT
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagattacgccctttttaaccaaaatttagtgaatagtagagaaaaagccaag
gctttaattttaaaaaaacaagttttagtcaataaggtagtaatctctaaaccatctttt
atgattaaagataatgatgaaattgaactcatcgctaaaaatctgtttgtcagtagggct
ggggaaaaattaggggcttttttagaaactcatagcatagattttaaagataagattatt
ttagatgtgggagcgagtaaggggggctttagcgaagtttctcttttaaaaggggctaaa
aaagtgctgtgcgttgatgtggggaaaatgcaattagatgagagtttaaaagataacaaa
cgcatagagtgttatgaagaatgcgatattagagcctttaaaacgctagaaaaaattgat
ttactactttgtgatgtgagctttatttcattatattgtattttagaagcgattttagct
ttaagcagtgagtttttggtgcttttcaaaccacaatttgaagtgggtaggaatgtaaaa
cgcaataaaaaaggggttgttatggatacaaaagccatttttaacgccttagaaaacttt
aaaaaccatttaagaacacagaatatgcaagttttaaatattcaagaaagcttagtgaaa
ggtaaaaacgggaatgttgaattttttatccatttcaagcgaacctaa
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