Helicobacter cetorum MIT 99-5656: HCD_07440
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Entry
HCD_07440 CDS
T02033
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Pathway
hcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HCD_07440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcm03400
]
HCD_07440
Enzymes [BR:
hcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCD_07440
DNA repair and recombination proteins [BR:
hcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HCD_07440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
nSTAND3
PriA_3primeBD
AAA_22
AAA_19
PhoH
ADDB_N
AAA_30
nSTAND_NTPase5
RecA_N
AAA_25
UvrD-helicase
AAA_11
AAA_7
TrwB_AAD_bind
TPR_DNAAF5
SLFN-g3_helicase
DUF87
TsaE
Motif
Other DBs
NCBI-ProteinID:
AFI06479
UniProt:
I0EU60
LinkDB
All DBs
Position
complement(1579003..1580862)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYYLVAPLKNKTPPLTYYSKKSCEKGVLVHITLRNKTIQGVILKGVEKPSFECLECEKT
PFFLLPPQIKLAEFIAQYYCANLSLVLSLFTPFHACDSMELEKITPTLNVLNEAQTKALK
ELEKHSVSLLFGDTGSGKTEIYMHLIAQTLEQKKSALLLVPEIALTPQMQQRLKVAFKDY
LGLWHSKLSKNQKKEFLERLYSQKIRLVVGTRSALFLPLRELGLVIVDEEHDFSYKSQQS
PMYNARDLCLFLASKFPIQVVLGSATPSLNSYKRFKDKALIRLKGRYTPTQKNIIFEKTQ
DFVTPKLLETLQQVIDKNEQAIIFVPTRANFKTLECQNCHKSIQCPFCSVNMSLHLKTQK
LMCHYCHFVSPIPRICNVCQNEVLVGKRIGTMQVFKELESLLKGARMAILDRDHTSTQKK
LNNILSDFNHQKTNILIGTQMISKGHDYAKVSLAVILGIDNIIKSSSYRALEEGVSLLHQ
IAGRSARQISGLVFIQSIEVDLLKNFLDDYEDFLQYELKERCELYPPFSRLCLLEFKHKN
EQKAEKLSIEASKILSSCLEKGVTLSHIKAPIEKIASFYRYLILLRSSNPISLLKSVHAF
LKTAPHIPCSVNIDPIDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctattacttagtcgctcctttaaaaaataaaaccccccctttaacctactattct
aaaaagagctgtgaaaaaggggtgttagttcatatcactttgagaaataaaacgattcaa
ggcgttattcttaaaggagtagaaaaaccttcttttgaatgcctagaatgtgaaaaaacg
cccttttttttactcccccctcaaatcaagctcgctgaatttatcgctcaatattattgt
gctaatctctctttagtcttaagcctttttaccccttttcatgcatgcgatagtatggaa
ttagaaaaaatcacgcccactctaaatgtcttaaatgaagctcaaacaaaagccttaaaa
gaattagaaaagcattctgtaagcttgctctttggcgatacaggtagcgggaaaactgaa
atttatatgcatttaatcgctcaaactttagagcaaaaaaagagtgcattattacttgtg
ccagaaatcgcactcactccacaaatgcaacaacgcttaaaagttgcgtttaaagactat
ttaggcttatggcatagcaaactctctaaaaatcaaaaaaaagagtttttagaaaggctc
tactctcaaaaaataaggcttgttgtaggcacacgaagtgcgttattcttgccccttaga
gagctaggcttagtgattgtagatgaagagcatgacttttcttacaaatctcagcaaagc
cctatgtataatgctagagatttatgcttatttctagcgagcaaatttcctattcaagtt
gtcttaggctctgctacgcctagcttaaatagctacaaacgctttaaagataaggcttta
atacgcctaaagggtcgctacactcccacacaaaaaaacatcatctttgagaaaacgcaa
gattttgttaccccaaagcttttagaaactttacagcaagtcatagacaaaaacgagcaa
gccattatttttgtgcctacaagggcaaatttcaaaaccttggagtgtcaaaattgccat
aaaagcattcaatgccccttttgtagcgtgaatatgagtttgcatttaaaaactcaaaag
cttatgtgtcattattgccattttgtaagccctatccctaggatttgtaatgtgtgccaa
aatgaagtcttagtgggtaaaagaataggcacgatgcaagtgtttaaggaattagagagc
cttttaaaaggggcgagaatggccattttagatagagaccataccagcacacaaaaaaag
ctcaacaacattttaagtgattttaatcatcaaaaaaccaacattctaattggcacacaa
atgataagcaaagggcatgattatgctaaagtgagtttagcggttatcttaggcatagat
aatatcatcaaatctagtagctatagggctttagaagaaggtgtgtcattattgcatcaa
atcgctggaagaagtgcaagacaaatttctggcttagtattcattcaaagcatagaagtg
gatttattaaaaaatttcttagatgattatgaagattttttgcaatacgaattgaaagaa
aggtgcgaactttacccacctttttcaaggctgtgtttgttagaatttaagcacaaaaat
gaacaaaaggctgaaaaactaagcatagaagcttcaaaaatcctttcttcgtgtttggaa
aagggcgtaacgctctctcatattaaagcccctattgaaaaaatcgcttctttttatcgc
tatcttattttattgcgttcttcaaaccccataagtctattaaaaagcgtgcatgcgttt
ttaaaaaccgccccccatatcccttgtagtgtgaatatagaccctatagatattttttaa
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