Helicobacter cetorum MIT 99-5656: HCD_07515
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Entry
HCD_07515 CDS
T02033
Name
(GenBank) 16S ribosomal RNA methyltransferase RsmE
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcm03009
]
HCD_07515
Enzymes [BR:
hcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
HCD_07515
Ribosome biogenesis [BR:
hcm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HCD_07515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
DCP2
GadE_N
Motif
Other DBs
NCBI-ProteinID:
AFI06492
UniProt:
I0EU73
LinkDB
All DBs
Position
complement(1592962..1593642)
Genome browser
AA seq
226 aa
AA seq
DB search
MRFVYHSLAKEPTLKIEGESYTHLYRSRRVKSTSCLELRNLKDKFLYTYKHVEITKKYAL
LKLVNQQELEIMAHKKAHLILSVIETKSIERILPFLNQLGVSKLSLFYADFSQRNEKIDS
VKLERFKKILINSCEQCGRSDLMGLEVFSSTKDMLKAYPKASVLDFNGEKLQTSLNAENG
IIIGPEGGFSEQEREQFKERETYRIPLDMVLKSESACVFIASVVQV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgtttaccattctttagctaaagagcctactttaaaaatagaaggggagagt
tacacgcatttatatcgttcaaggcgtgtgaaaagcacgagttgtttggagttgagaaat
ttaaaagataaatttttatacacctataagcatgtagaaatcactaaaaaatacgctctt
ttaaagttagtgaaccagcaagaattagagattatggctcataaaaaggctcatttgatt
ttaagcgttattgaaacaaaaagcattgaaaggattttaccctttcttaaccagttgggc
gtaagtaagctaagcctgttttatgctgattttagccagcgtaacgaaaagatagatagt
gtcaaattagaacgatttaaaaaaattttgattaattcttgtgaacaatgtgggcgtagc
gatttaatgggattagaagtgttttcaagcacaaaagatatgctaaaagcttaccccaag
gcaagtgttttggattttaatggtgaaaaattgcaaacaagcttgaatgctgaaaatggc
atcatcataggacctgaagggggctttagtgagcaagaaagagagcaatttaaagagcgt
gaaacctatcgcattccactagatatggtcttgaaatctgagagtgcatgcgtgtttata
gcaagcgtggtgcaggtttag
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