Helicobacter cetorum MIT 99-5656: HCD_08115
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Entry
HCD_08115 CDS
T02033
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Pathway
hcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HCD_08115 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcm03400
]
HCD_08115 (ruvB)
Enzymes [BR:
hcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCD_08115 (ruvB)
DNA repair and recombination proteins [BR:
hcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HCD_08115 (ruvB)
RecFOR pathway proteins
HCD_08115 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
DUF815
NB-ARC
TIP49
nSTAND3
RNA_helicase
AAA_2
Sigma54_activ_2
Bac_DnaA
AAA_3
AAA_14
bpMoxR
DUF3738
Rad17
HAMP_2
AAA_PrkA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AFI06607
UniProt:
I0EUI8
LinkDB
All DBs
Position
complement(1720646..1721656)
Genome browser
AA seq
336 aa
AA seq
DB search
MKERLVNLETLDFETSQEVSLRPNLWEDYIGQEKIKSNLQISIQAAKKRQESLDHMLFFG
PPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAI
EEILYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQ
FYSPSELTLIIKKAALKLNQSIEEESANEIAKRSRGTPRIALRLLKRVRDFALVKNSSLM
DLNITLHALNELGVNELGFDEADLMYLSLLANAQGKPVGLNTIAASMREDENTIEDVIEP
FLLANGYLERTARGRIATPKTYTLLKIPTTNPATLF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgactagtcaatttagaaactttagattttgaaacttctcaagaagtgagt
ttgcgccctaatctttgggaagattatatcggtcaagaaaaaattaagagcaatttacaa
atctctatccaagccgctaaaaaacgccaagaaagtttagaccacatgcttttttttggt
ccgccgggtttgggtaaaacttccattagtcatatcattgccaaagaaatggaaaccaac
atcaaaatcacagccgcccctatgatagaaaaaagcggtgatttagccgccattctcact
aacttacaagctaaggacattctttttattgatgaaatccacagacttagccctgctatt
gaagagattttatacccagctatggaagactttagattggatattatcataggttcaggc
ccagcagctcaaaccattaaaattgatttaccccctttcactttaataggggctactact
agagctggcatgctttctaatcctttaagagatagatttggcatgagttttagaatgcaa
ttttatagccctagcgaattaactctcatcattaaaaaagcagcgttaaaactcaatcaa
agcatagaagaagaaagcgctaatgaaattgctaaaagaagtcgtggcacacctagaatt
gctttaaggcttttaaaaagggtgcgtgattttgctctagtaaaaaattcaagcttaatg
gatttaaacattactttacatgctttaaatgaattaggtgtgaatgaactaggttttgat
gaagcggatttgatgtatttatccttgttagctaacgctcaaggaaagccggtaggttta
aacacgattgctgcatccatgagagaagacgagaatactattgaagatgtgatagagcct
tttttactcgctaatggctatttagaacgcaccgctagaggaagaatcgctacacctaaa
acttatacgcttttaaaaatccctacaactaatcctgcaactttattttaa
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