Helicobacter pylori HUP-B14: HPB14_02025
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Entry
HPB14_02025 CDS
T02035
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn02020
Two-component system
hcn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPB14_02025 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPB14_02025 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcn03021
]
HPB14_02025 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hcn02035
]
HPB14_02025 (fliA)
Transcription machinery [BR:
hcn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPB14_02025 (fliA)
Bacterial motility proteins [BR:
hcn02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPB14_02025 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
MarR
MarR_2
KORA
DUF4202
TetR_C_44
HTH_34
HTH_10
DUF3209
DUF7440
Motif
Other DBs
NCBI-ProteinID:
AFI07116
LinkDB
All DBs
Position
412215..412982
Genome browser
AA seq
255 aa
AA seq
DB search
MILMMENRMPKGIQKTEASEKSIEKVLNAYDKQQHHHQDDLAIQYLPAVRAMAFRLKERL
PSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRSNRK
LIKSIDIEITKYLNEHGKEPSDAYLAEVLGENIEKIREAKTASDIYALVPIDEQFNAIEQ
DEITKKIEAEELLEHVQKVLNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIK
EVIKKVRKSLGVDHG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaaggaattcaaaaaactgaagcgagcgaa
aaaagtatagaaaaggttttgaacgcctatgacaagcaacaacaccaccatcaagacgat
ctcgctatccagtatttaccagccgtgcgtgctatggcgtttcgtttaaaagagcgcttg
cctagctctattgattttaacgatctggtttctattggcactgaagaattgattaaatta
gccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaaactcgtgtc
aatggggcgatgctagattatttgcgttctttagatgtgatttctcgctctaataggaag
ctgattaaaagcattgatattgaaattaccaaataccttaatgagcatgggaaagagcct
agcgatgcgtatctagcggaagttttaggcgagaatattgaaaagattagagaagccaaa
acggcctcagatatttatgcgttagtgccaatagatgaacaattcaatgcgattgagcaa
gatgaaatcactaaaaaaattgaagcagaagagttgttagagcatgtccaaaaagtattg
aatcaaatgagcgaacgagagcaaatccttatccagctttattactttgaagagttgaat
ctgagcgagattaaagagattttaggcatcactgaatcgcgcatttctcaaatcattaaa
gaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
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integrated database retrieval system
