Helicobacter pylori HUP-B14: HPB14_03475
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Entry
HPB14_03475 CDS
T02035
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPB14_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcn03019
]
HPB14_03475
Enzymes [BR:
hcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPB14_03475
Messenger RNA biogenesis [BR:
hcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPB14_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AFI07394
LinkDB
All DBs
Position
complement(710492..711700)
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AA seq
402 aa
AA seq
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MFELEKELKELFDIYEKSPYELYLVGGCVRDCLMGITPKDYDLTSNALVNESKELLLKCH
FRVLETGIKHGTITALKNHQSYEITTFRMEKGHIKHRKPKELVFSAHLTDDLKRRDFSMN
AIAYSPTKGLIDPFKGQNAIENQTIECVGEARLRFFEDALRILRALRFSATLGFKIAPST
KEAVFACKDLLKHLSKERLQSELNKLLMGKNAYEVAKEYQEILELVIQEKIENLGFLKNA
PLNLELRLLGFFKHQKSLENLRYPKKTCVLFSKAKECHKAFLNTYNKTELKFLLKDYDLE
PFNLALDFYALENPKHALKIKGLLKEIFDSNEPFKKEHLALKGGALQSLGYQHQKIGEIL
NACLNLVIAHPKNNALEWLIKWVKGNYLPNDAINHSPIGRKN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagctagaaaaagaattaaaagaattgtttgatatttatgaaaaatccccttat
gagctttacttggtaggggggtgcgtacgcgattgtttgatgggcattaccccaaaagat
tacgatttgacctcaaacgctttagtcaatgaaagcaaggagcttcttttaaagtgccat
tttagggtgctagaaaccggcatcaaacatggcacgatcacggctcttaaaaaccatcaa
agctatgaaatcacaacttttagaatggaaaaagggcatatcaaacaccgaaagcctaaa
gaattggtttttagcgctcatttaacggacgatttaaagcggcgcgattttagcatgaat
gcgatcgcttatagccctacaaaagggctgatcgatccttttaaagggcaaaatgcgatt
gaaaatcaaacgattgaatgcgtgggggaagcgcgattgaggttttttgaagacgcttta
aggattttaagagcgctgcgatttagcgcgactttaggctttaagatagcaccaagcact
aaagaagcggtttttgcgtgtaaggatttgttaaaacacctttctaaagagcgcttacaa
agcgaattgaataagcttcttatggggaaaaacgcctatgaagtggctaaagaatatcaa
gaaattttagagttggttattcaagaaaaaatagaaaatttagggtttttaaaaaacgcg
cctttgaatttggaattaagattgttagggtttttcaagcatcaaaaaagtttagaaaat
ttacgctaccctaaaaaaacttgtgttttattttcaaaagctaaagaatgccacaaagct
tttttaaatacctataataaaacagagttaaagtttttattaaaggattacgatttagag
ccttttaatctggctttagatttttatgcgctagaaaaccccaaacacgctttaaaaatc
aaaggcttgttaaaagaaatatttgattctaacgagccttttaaaaaagaacacctagcc
cttaagggcggtgcgcttcaaagcttgggttatcagcaccaaaaaatcggcgaaatttta
aacgcatgcttaaatttagtcatcgctcaccctaaaaacaacgctttagagtggctgata
aaatgggttaagggtaattatttacctaatgatgctataaatcactcgccaataggcaga
aaaaattaa
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