Helicobacter pylori HUP-B14: HPB14_03565
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Entry
HPB14_03565 CDS
T02035
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPB14_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcn03400
]
HPB14_03565
DNA repair and recombination proteins [BR:
hcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HPB14_03565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smr
MutS_V
AAA_22
AAA_21
AAA_15
Thiamine_BP
Motif
Other DBs
NCBI-ProteinID:
AFI07412
LinkDB
All DBs
Position
729891..732137
Genome browser
AA seq
748 aa
AA seq
DB search
MNNNNTLPKPLEESLDLKEFIALFKTFFAKERDTIALENDLKQTFTYLNEVDSIGLIAPK
SVKESDLIVVKLTKLGTLHLDEIFEIVKRLHYIVVLQNAFKTFTHLKFHERLNAIVLPPF
FNDLIALLDDEGKIKQGANATLDALNESLNRLKKESAKIIHHYARSKELAPYLVDTQSHL
KHGYECLLLKSGFSSAIKGVVLERSANGYFYLLPESAQKIAQKIAQIGNEIDCCIVEMCQ
TLSRSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFTQKKMVLENFSHPIL
KEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKHLIPMKINAHHSIIPYFKEI
HAIINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDEIELGTDADEASSLYKTLLEKL
LKQNNQIIITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETALR
YGVPHFLIEKAKAFYGEDKEKLNVLIENSSALERELKQKNESLENALKEQEDLKNAWLLE
MEKQKEIFHNKKLELEKSYQQALNILKSEVASKDTSSMHKEIHKASEILNKHKTDQEIPQ
TITSFQINEKARYKNESVLIVQILDKGYYLVETELGMRLKAHGSWLKQIQKPSKNKFKLP
KTTIPKPKEASLRLDLRGQRSEEALDLLDAFLNDALLGGFEEVLICHGKGSGILEKFVKE
FLKNHPKVVSFSDAPINLGGSGVKIVKL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataataccctacccaaacccctagaagaaagcctggatttaaaagagttt
atcgctctttttaaaaccttttttgcaaaagaaagagatactattgctttagaaaacgat
ctcaagcaaactttcacttatttaaacgaagtggattcgatcggtttgatcgcccccaaa
agcgtgaaagaaagcgatcttattgttgtcaaactcaccaaattagggacgctccattta
gatgaaatttttgagattgtcaaacgattgcactacattgtcgttttacaaaacgccttt
aaaactttcacgcatttaaaatttcatgaacgccttaacgctattgtcctgccccctttt
tttaacgatctaatcgctttattggatgatgaaggaaagatcaaacaaggggcgaacgct
accctagacgctttgaatgaaagtttgaaccgccttaaaaaagagagtgcaaaaatcatt
caccattacgcccgctctaaagagcttgccccttatttagtggatacgcaaagccatctt
aagcatggttatgaatgccttttattgaaaagcgggttttctagcgcgattaaaggcgtt
gtgctagaaaggagcgctaatggctatttctacctcttgcctgaaagcgcgcaaaaaatc
gcgcaaaaaatcgcgcaaattggtaatgaaatagattgctgtattgttgaaatgtgccaa
actctaagccgtagcttgcaaaaacaccttttatttttaaaattccttttcaaagaattt
gattttttagacagcttgcaagccagactcaatttcgctaaagcctacaatttagaattt
gtcatgccaagctttacgcaaaaaaaaatggttttagaaaacttttcgcaccccatttta
aaagagccaaagcccttaaatttgaagtttgaaaaatccatgctcgctgttaccggcgtg
aatgcgggcgggaaaaccatgctcttaaaatcgcttttaagcgcggcttttttaagcaag
catctcattcctatgaaaatcaacgcccatcattccattatcccctattttaaagaaatc
cacgccattatcaacgacccccaaaacagcgcgaacaatatctctactttcgccggcaga
atgaagcaatttagcgctcttttatctaaagaaaacatgcttttaggcgttgatgaaata
gagctagggactgacgctgatgaagcgagcagtttgtataaaaccctgttagaaaaattg
ctcaaacaaaacaaccaaatcattatcaccacgcaccacaaacgcttgagcgtgttaatg
gcagaaaacaaggaagtggaattactagccgctctttatgacgaagaaaaagaacggccc
acttacacttttttaaagggggttattggcaaaagctatgcgtttgaaaccgctttgcgc
tatggcgtgccgcattttttgattgaaaaagcgaaagccttctatggcgaagataaggaa
aaattgaatgttttgattgaaaattccagcgcgttagaaagggaattgaaacaaaaaaat
gaaagcttagagaacgctttaaaagagcaagaagatttaaaaaacgcttggcttttagag
atggaaaaacaaaaagaaatctttcataataaaaaattggaattggaaaaatcctaccaa
caagccctaaatatcttaaaaagcgaagtcgcttcaaaagataccagctccatgcataaa
gaaatccataaggcgagcgagattttaaataagcataaaacagaccaagagatcccccaa
acaataacaagctttcaaattaacgaaaaagcgcgttacaagaatgaaagcgtactgatt
gtgcaaattttagacaagggctattatttggtagaaaccgagcttggcatgcgtttgaaa
gcgcatgggagttggttgaaacaaatccaaaaaccctctaaaaacaaattcaaactccct
aaaacaaccatccccaaacctaaagaagcgagcttgcgccttgatttaagggggcaacgt
agcgaagaagctttagatttactagacgcttttttaaatgatgcgcttttagggggcttt
gaagaagtgctgatttgccacggcaaagggagcgggattttagaaaagtttgtgaaagaa
tttttaaaaaaccaccccaaagtggtgagctttagcgacgctcccattaatttaggcggc
agtggggttaaaatcgttaaattgtag
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