KEGG   Helicobacter pylori HUP-B14: HPB14_05445
Entry
HPB14_05445       CDS       T02035                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hcn  Helicobacter pylori HUP-B14
Pathway
hcn02024  Quorum sensing
hcn03060  Protein export
hcn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPB14_05445
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPB14_05445
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPB14_05445
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hcn02044]
    HPB14_05445
Enzymes [BR:hcn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPB14_05445
Secretion system [BR:hcn02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPB14_05445
  Eukaryotic Sec-SRP protein
   HPB14_05445
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 Zeta_toxin AAA_22 AAA_30 nSTAND3 AAA_24 cobW AAA_17 NPHP3_N SLFN-g3_helicase 6PF2K AAA_19 APS_kinase ArsA_ATPase AAA_14 AAA_16 Fer4_NifH AAA AAA_11 T2SSE AAA_33 NTPase_1 Thymidylate_kin ABC_tran KAP_NTPase ParA NACHT KTI12 AAA_5 ResIII AAA_18 TsaE MraZ ParBc ATP_bind_1 YqeC
Other DBs
NCBI-ProteinID: AFI07769
LinkDB
Position
complement(1138141..1139487)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKAS
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIVSLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcattaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagacagagcgttagacgaattgaaaaaaacgcttttaaaaaacgat
gtgcatcataaagtcgctagagaattgctcaaaaaagtggaaagccagactaaagcgagt
ggcatcggtaagcagcaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggtttcactttcgctcaaacgccccccactgtggttttaatggca
ggtttgcaagggagcggtaagacaaccacgaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgtgcatgcgatttgcaacgcttagcggcagtggagcaa
ttaaaggttttgggtgaacaggtgggcgtggaagtgttttacgaagaaaataaaagcgtg
aaagaaatcgccaacaacgctttaaaaagggctaaagaagcacaatttgacgttttgctc
gtggatagcgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaagtc
aaagaagtcttaaacccccatgaagtgctgtatgttgcagacgcattgagcgggcaagat
ggggtcaaaagcgcgaacacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgctttaggcatcacttatcaattgggctta
cccttgcggtttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattgtctcgctcgctgaaaaaaccgcc
agcgttctaaaccctaatgaagccaaagacttaagcaaaaagctcaaaaaagggcaattc
actttcaacgattttttaaaccaaattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaagcgcgctaaaagacacggattta
gaaagttctttagaagtgaaaaaaatcaaggctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaaccgcattatcaaacgctttgatcaagcgagcaaaatggct
aaacgcttaacgaataaaaagggtattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacgccccctaaaatgcgctaa

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