Helicobacter pylori HUP-B14: HPB14_06180
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Entry
HPB14_06180 CDS
T02035
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPB14_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcn03021
]
HPB14_06180
03400 DNA repair and recombination proteins [BR:
hcn03400
]
HPB14_06180
Enzymes [BR:
hcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPB14_06180
Transcription machinery [BR:
hcn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPB14_06180
DNA repair and recombination proteins [BR:
hcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPB14_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
AFI07912
LinkDB
All DBs
Position
complement(1290799..1291833)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEHIEIVNPEMPLAIINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSHEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgcttgct
catcctattagaagactcttgcttttaagttctgtggggtatgctcctgtgggtttaaag
attgaaggtgtgcatcatgagtttgactctttaaggggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcatatagaaattgtcaatccggaaatgcccctagcgata
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggctacatgccattagacggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaacgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaactaggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagatttgagtgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagggcgtgaagaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccatgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
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