Helicobacter pylori HUP-B14: HPB14_07110
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Entry
HPB14_07110 CDS
T02035
Name
(GenBank) DNA helicase II (UvrD)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn03420
Nucleotide excision repair
hcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPB14_07110
03430 Mismatch repair
HPB14_07110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcn03400
]
HPB14_07110
Enzymes [BR:
hcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPB14_07110
DNA repair and recombination proteins [BR:
hcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPB14_07110
MMR (mismatch excision repair)
Other MMR factors
HPB14_07110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AFI08092
LinkDB
All DBs
Position
complement(1456918..1458963)
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILGNLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLNNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDE
VKTLCKQLKISNFRANISQIKNGMMDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSCTHHNLCVVGDDDQSIYGF
RGADISNILNFYKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGVLSFYERAEVKDALAFMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEDLN
LEEALKLGAFKDKLNSKNEYALKKFMAMIGRLREAFEISVEKFCERFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDVHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKIS
CSPSVFLEEAKLLKSDQTPKQNHQKNTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISEKFVEKVDNEF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttaggcaatttgaacggagcacaaaaaatcgctgcaagc
cacattcaagggcctttattgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattattgaac
aatcaagcccttatcccccctttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgaatcttttaaaaagggcgtgcgatttttcggtgctagatagcgatgaa
gtcaaaacgctgtgcaagcagctcaaaatttcaaactttagagccaatatttctcaaatc
aaaaacggcatgatggatttgagcatgcaagatagcgaatgctataaagcgtatgagctt
tatcaaaacgcgctcaaaaaagacaatttagtggattttgatgatttgctttttttaagc
cttaagattttacaagataatgaaaaactcgccaaagaaactagcgagcgctaccattac
atcatggtagatgagtatcaagacacgaacgccctgcaattggaatttttaaaacaattg
agttgcacgcatcataatttgtgcgtggtgggcgatgacgatcagagcatttatgggttt
aggggggctgatatttctaatattttaaatttttacaagcattttaaaggggctaaaata
gtgaaattagagaccaactaccgctctagcgctgaaattttagcgtgcgctaattctttg
attagccataaccaacaccgccatattaaaacgcttcagagtttcaaaggctcgcataaa
agcgtggtttgtaaggaatatttgacgcaaaaagaagagagtttggatgtggcttatcaa
atcaaagcccttttaaagaagggcgagaatttagaaaatatcgctattttgtaccgctta
aacgggcttagccgcagcattgaagagagtttgaacgctttgaatatcccttataggctc
attggggtgctgagtttttatgaaagagccgaggttaaagacgctttggcgttcatgcat
gtagtggcgaaaaaagacgatcgcttttttattaagcgcgttttaaacaagcccccaaga
ggccttggcaagatcactcaagaatggattttttctcttttagatgaagaggatttgaat
ttagaagaagcgctaaaacttggggcgtttaaagacaaactaaactctaaaaacgaatac
gctttaaagaaattcatggccatgatagggcgtttgagggaggcttttgaaatttcagtg
gagaagttttgcgagcggtttttagaagagactaatcttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttaagtttagtgaaagagcat
tttaaaactaaccccacgcattctttactggattttttgaatgaaagcgtgttggatgtt
cacaatacagaaaacgcgcaaaaagtgagctgcatgagcgtgcatatgagtaaggggtta
gagtttaagcatgtgtttgtgatcggattagaagaagggtttttcccgcataggggattc
aatcaagaaagcgatttggaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaaggattgcaactttcttatgtcaaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaagccaagctacttaaaagcgatcaaacccctaaa
caaaatcaccaaaaaaatacgcccattaaagtgggggatttgatcaaacataagattttt
ggcaccgggagggttttaggcgtggaaaagggcttgagcggtttgtgtttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataacgag
ttttga
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