Helicobacter pylori HUP-B14: HPB14_07460
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Entry
HPB14_07460 CDS
T02035
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn03030
DNA replication
hcn03430
Mismatch repair
hcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPB14_07460
03430 Mismatch repair
HPB14_07460
03440 Homologous recombination
HPB14_07460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcn03032
]
HPB14_07460
03400 DNA repair and recombination proteins [BR:
hcn03400
]
HPB14_07460
Enzymes [BR:
hcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPB14_07460
DNA replication proteins [BR:
hcn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPB14_07460
DNA repair and recombination proteins [BR:
hcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPB14_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFI08160
LinkDB
All DBs
Position
complement(1544612..1545475)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDNLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFIETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPIKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
SDLTGITYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRSKYQETPPPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacctcttgcataaagacatccaagccctaatcgctcgcttaaagcaccag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatttaaaagcatgcgggcttaatttcatagaaacgagtgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagagacc
accggctcttgccccataaagcatgagattttagaaatcggggccgtgcaagtgaaaggg
ggggaaattatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatt
tctgatcttacaggcatcacttatgaagacaccctaaacgccccaagcgcgcatgaagct
ttgcaagaattgaggctttttttaggcaatagcgtgtttgtggcccacaacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggcatagaagtcagccatagagcctacgcagacgct
ttagcgagctataaactctttgaaatatgcctgttaaacttgcccagttacatcaaaaca
acaatggatttgattgatttttccaaatgtgctaacactcttatcaaaagacccccaaga
tccaaataccaagagactccaccgccattttctctttttgaaaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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