Halomonas chromatireducens: LOKO_00156
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Entry
LOKO_00156 CDS
T04292
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_00156 (phrB)
Enzymes [BR:
hco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LOKO_00156 (phrB)
DNA repair and recombination proteins [BR:
hco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LOKO_00156 (phrB)
Prokaryotic type
LOKO_00156 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMC99254
UniProt:
A0A0X8HB67
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All DBs
Position
complement(157209..158624)
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AA seq
471 aa
AA seq
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MTCVLMWFRSDLRVHDNTALAAAARQGPVVAVFLRCLPQWQRHGHGANKLDFWHRGVSAL
RRELAGLNIPLLHRDIEAYDQAPTTLLALARETGAQRLHFNREYPLDEQRRDQTVITDFE
RAGLSARGHHDATAFAPGELLTGNGGYYRVFTPFAKAWHRQLSAERLTLHDTPPPQSPPA
IASDPLPPSPHLGEQPVATEDWPAGAEPAADRLERFLRFRGRHYARQRDIPAIQGTSELS
PYLALGMVSHRQCLQAVLGENHGRLAEGDAGLVAWVNELVWREFYQHVAAGFPRVCQHRA
FQRHTEYVAWRNDEAGFRAWCEGRTGYPLVDAAMRQLVQTGWMHNRLRMITAMFLSKHLL
IDWRRGESFFLHHLVDGEFCANNGGWQWAASTGTDAAPYFRVFNPTTQSSRFDSEGAFIA
KFVPELAALPPKGRLAPSAEQRQQTHYPPPVVDHKVARLRAIDAFKALKPD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcgtactgatgtggtttcgcagcgacctgcgagtccatgacaataccgcactg
gctgccgcagcacgccagggccctgtggtagcggtcttcctgcgctgcctgccccagtgg
cagcgccatggccatggcgccaacaagctcgacttctggcaccgtggcgtatcggcactg
cgcagggagctggccggcctgaacattccgctgctgcaccgggatatcgaggcctacgac
caggccccgacaaccctgctcgccctggctcgggaaaccggtgcgcagaggctgcatttc
aatcgcgagtacccgctggacgaacagcgccgcgatcagaccgtaatcaccgacttcgag
cgggccgggctctccgccagagggcatcacgacgccacggcctttgcccccggcgagctg
ctgacgggaaacgggggctactatcgcgtcttcactcccttcgccaaggcttggcaccgg
cagctcagcgccgagcgcctgacccttcacgatacccctcctccccagtcacccccggcc
attgccagcgacccactgccgccctctccccatctcggcgaacagcccgtggccaccgag
gattggcctgccggcgcagaaccggcggccgaccggctcgagcgttttctgcgctttcgt
ggtcggcactatgcgcggcagcgtgacattccggccatccagggcaccagcgagctctcg
ccctacctggcactgggaatggtttcccatcgccagtgcctgcaggcggtgcttggcgaa
aaccatggccgcttggccgagggggatgccggcctcgtggcctgggtgaacgaactggtc
tggcgtgagttctaccagcacgtggctgcgggctttccgagggtgtgccagcaccgcgcc
tttcagcggcataccgaatacgtggcgtggcgcaatgacgaagccggctttcgtgcctgg
tgcgaagggcgtaccggctaccccctcgtcgatgccgccatgcgccagctggtgcagacc
ggctggatgcacaaccgcctgcgcatgatcaccgccatgttcctcagcaagcacctcttg
atcgactggcgacgcggcgagagcttcttcctgcatcatcttgtcgacggcgaattctgc
gccaacaacggtggctggcagtgggcggcttccaccggcaccgacgccgcaccctatttc
cgcgtcttcaacccgaccacccagtcgagtcgcttcgactccgagggtgccttcatcgcc
aaattcgtgccggagctggccgcgcttccccccaagggcaggctggctccgtccgcggag
caacgtcaacagacccattacccaccaccggtcgtcgatcacaaggtcgccaggctaaga
gcgattgacgccttcaaggcactgaaacccgactga
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