Halomonas chromatireducens: LOKO_00370
Help
Entry
LOKO_00370 CDS
T04292
Symbol
recD_1
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hco
Halomonas chromatireducens
Pathway
hco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOKO_00370 (recD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_00370 (recD_1)
Enzymes [BR:
hco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LOKO_00370 (recD_1)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOKO_00370 (recD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
nSTAND3
SLFN-g3_helicase
AAA_28
DUF3375
NTPase_1
AAA_16
T2SSE
TrwB_AAD_bind
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AMC99466
UniProt:
A0A109UKU5
LinkDB
All DBs
Position
complement(370080..372527)
Genome browser
AA seq
815 aa
AA seq
DB search
MSKRSKHHDDATPDLFADLGEESGASNEVGISNESNASTEAGIGDAPGKSEPTRPEPPLA
ALHDTQALFALLDRWVERGWLRALDRALASFFQREVSDAPPLLLLAAALASHQLGRGHVC
LDLAQTLAAPDLALSLPPEGDDLSDPPPLPSDLLAGLELATWRDALHHPALVADGSGPGN
TPLVRSEHDGNVRLYLRRYWQYERDIRHHISARLGTSDDALPSSTSDEICRRKLQLTTGA
DRRPGDATDTNRFATALDSLFPSSADIDWQKIACALAAQAHFAVITGGPGTGKTTTVVKL
LALLQALALGEPVQAGSGAPRPLRIRLAAPTGKAAARLNESIAKQVQGLSLVELAAAVGQ
QGVDISTLRDSIPTEVTTLHRLLGSRPDTRHFRHYAGNPLALDALVIDEASMVDIEMMAA
VLTALPPRARLILLGDKDQLASVEAGAVLGDLCQRAEGGHYTPASCDWLERVTGTPIPER
YRDESGLPLDQAIAMLRVSHRFDAKSGIGQLAEAVNRPLGPDHGQKEKKRAVREIFQQGY
ADIARLALADADDPALDRLVVNGNPTGFANSSEGRHDRRSEPIAPPVGYGHYLEVMKAAR
PAQPFFGEGEARQPYDDWARQVLAAHGHFQLLCALRKGPWGIQGLNPRIGRALRRAGWLK
ASDPELEQGWFEGRPVLVTRNDYSLGLMNGDIGITLAVPEARSASESPGRTLLRVAFPAS
DGSGDIKWVLPSRLQAVETVFAMTVHKSQGSEFTHTTLLLPDAPNPILTRELVYTGITRA
RDWLTLVETGRGMLDEAVTREVVRVSGLGITSGQD
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcagcaagcaccacgacgacgccaccccggacctgttcgccgatctcggt
gaggaatcaggcgccagtaacgaagtaggtattagcaacgaatcaaatgctagcaccgaa
gcaggcattggcgacgcaccaggcaagagcgaacccaccaggccggaaccgcccctggcc
gcgcttcacgacacccaagcgctgttcgccctgctcgaccgctgggtggagcgcggctgg
ctgcgtgcgctggaccgggcactggccagcttcttccagcgtgaagtgagcgacgcccct
cccctgctgctgctcgcagctgcccttgccagccatcagctcggccgcggccacgtctgc
ctcgatctcgcccagaccctggccgcgcccgacctggcgctctcgctgccgccggaaggc
gacgacctcagcgacccgccgccgctgcccagcgacctgctggcagggctggaactcgcc
acctggcgcgacgccctgcaccatcccgccctggtggcggacggtagtggcccaggaaac
accccgctggtgcgcagcgagcacgacggcaacgtgcggctctacctgcgccgctactgg
cagtacgagcgggatattcgccaccacatctcggcaagactgggcacaagcgacgacgcc
ttaccctccagcacaagcgacgaaatctgtaggaggaagcttcagctcacgactggcgcc
gataggcgcccgggtgacgccaccgacactaaccgcttcgccactgctcttgattccctc
ttccccagcagcgcggacatcgactggcaaaaaatcgcctgcgccctcgccgcccaggca
cacttcgcggtgatcaccggcggccccggcaccggcaagaccaccaccgtggtcaaattg
ctcgccctgttgcaggcgctggccctgggcgagccggtgcaagcaggctcaggcgcccca
cgcccgctgcgtatccgcctggccgcccccaccggcaaggccgcggctcgcctcaacgaa
tccatcgccaagcaggtgcaggggctttcgctggtggaactggccgccgccgtgggccaa
cagggtgtggatatctcaaccctgcgcgacagcatccccaccgaagtgaccacgctgcac
cgccttctgggctcgcgaccggacacccgtcacttccgccactacgccggcaacccgctg
gcgctggacgccctggtgatcgacgaagcctcgatggtggatatcgagatgatggccgcc
gtgctcaccgccctgccgcccagggcgcggctgatcctgctcggcgacaaggaccagctc
gcctcggtggaagccggcgccgtactcggcgacctctgccagcgcgccgaaggcggccac
tacaccccggcctcctgcgactggctggaacgggtgactggcacgccgattcctgaacga
taccgagacgagagcggcctgccgctggaccaggccatcgccatgctgcgggtaagccat
cgcttcgatgcgaaaagcggcatcggccagctcgccgaagcggtcaaccgcccgcttggt
cccgatcatgggcagaaggaaaagaagcgcgccgtacgggagatcttccagcagggctac
gccgatattgcccgtctcgccctggcggatgccgacgacccagcgctggaccgcctggtg
gtaaacggcaacccgacaggcttcgccaatagcagtgaaggccgccacgaccgccgtagc
gaacccatcgcgccaccggtcggctacggccactaccttgaagtgatgaaagcagcgcgc
cccgcacaacccttcttcggcgaaggcgaagcgcgccagccctatgacgactgggcccgc
caggtgctcgccgcccatggccacttccagttgctgtgcgcactgaggaaaggcccatgg
ggcatacaaggattgaacccacgcatcggccgggcactccggcgcgccggctggctcaag
gccagcgacccggagctggaacagggctggttcgaaggccgcccggtgctcgtcacccgc
aacgactacagcctggggctgatgaacggcgatatcggcatcaccctcgccgtgcccgag
gcccgcagcgccagcgaatcgcccggccgcaccctgctgcgcgtcgccttcccggcaagc
gacggcagtggcgacatcaagtgggtgctgcccagccgcctgcaggcggtggaaaccgta
ttcgccatgacggtacacaaatcccagggctcggaattcacccacaccaccctgctgctc
cccgacgcgcccaacccaatcctcacccgcgagctggtctacaccggcatcacccgcgca
cgcgattggctaacgctggtggagacgggccgcgggatgctggatgaggcggtgacgagg
gaggtagtgagggtgagcgggttggggataacatcaggccaagattaa
DBGET
integrated database retrieval system
