Halomonas chromatireducens: LOKO_00593
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Entry
LOKO_00593 CDS
T04292
Symbol
potD_1
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein precursor
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hco
Halomonas chromatireducens
Pathway
hco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOKO_00593 (potD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hco02000
]
LOKO_00593 (potD_1)
Transporters [BR:
hco02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LOKO_00593 (potD_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
CdiA_helical
Motif
Other DBs
NCBI-ProteinID:
AMC99681
UniProt:
A0A0X8HBQ1
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All DBs
Position
614193..615191
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AA seq
332 aa
AA seq
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MPGLAVSAGAQALTVISFGGASGDAMQQAYYGPFQESTGVNLTPGDYNGELSRIRAMVET
GNVSWDLVEMESPELVRGCFEGLFEPIDWGRLGLGNELIDSAFDECGVGTFVWSTVLAYD
ADALDTPPTSWADFWDVEQFPGTRGLRRGAKYTLEFALMADGVPADEVYEVLESPEGVDR
AFAKLDEIKEHIQWWEAGAQPPQWLVAGDVVMTSSYNGRIAAAQEEGSNLEIVWNESIYD
LDYWAIVAGSEYVDEAYDFIIFASQPENQAAYSSLIPYGPVHPDAIAQLDEEQARRMPTH
EENMEGALAVDTAFWVDYGEELEQRFNAWAAR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgccggggctggccgtttccgctggcgcccaggcactgaccgtcatctcctttggcggt
gcgtccggtgacgccatgcagcaggcctactacggccccttccaggagagcacgggtgtc
aatctcacgccgggcgactacaacggtgagctgtcgcgcatccgggccatggtcgagacc
ggcaatgtcagctgggatctcgtggagatggagtcacccgagctggtccgcggctgtttc
gaggggctgttcgagcccatcgactggggccggcttggcctgggtaatgaactgatcgac
tcggcattcgatgagtgcggtgtcggcaccttcgtctggtccacggtgctggcctacgat
gccgacgccctggatacgccgccgacatcctgggccgatttctgggatgtggagcagttc
cccggtacccgtggcctgcgtcgcggcgccaagtacacgctggagttcgcgctcatggcc
gatggcgtgccggccgatgaggtctatgaggtgctcgagtcgccggaaggcgtcgaccgc
gcctttgccaagctcgacgagatcaaggagcacatccagtggtgggaggcgggtgcacag
ccgccccagtggctggttgccggtgacgtggtcatgacctcttcctacaacggccgcatc
gccgccgcccaggaagaaggcagcaacctggagatcgtctggaacgaaagcatctacgac
ctggattactgggccatcgtggcgggcagcgagtatgtcgacgaagcctacgacttcatc
atcttcgccagccagcctgagaaccaggccgcctactccagcctgattccctatggcccg
gtgcatccggatgccattgcccagctcgatgaagagcaggcgcggcgcatgccaacccat
gaagagaacatggaaggtgcgctggccgtggataccgctttctgggtcgactacggcgag
gagctggagcagcgcttcaacgcctgggcggcgcgctga
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