Halomonas chromatireducens: LOKO_00606
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Entry
LOKO_00606 CDS
T04292
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_00606
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LOKO_00606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_16
AAA_22
DUF7340
AAA_30
zf-tcix
DZR
Zot
DUF7577
Motif
Other DBs
NCBI-ProteinID:
AMC99694
UniProt:
A0A0X8HBS7
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All DBs
Position
632804..634612
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AA seq
602 aa
AA seq
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MTLSSTVSPPARQPALRPYQQQAVKRVVEHFRAGHEPAVVVLPTGSGKSLVIAELARLAR
GRVLVLAHVRELVVQNHAKYQDYGLEADIFSAGLGLKESARQVVFGSVQSVMRNLDRFAA
GDHPRGAFTLLVIDECHRVSMDEDSSYRRVIDRLRRHNPSLKILGLTATPYRLGQGFIYH
RHHHGMVRGDDDCFFRDCVFEQPLRLMVKQGYLAPPARVDAALFKDGKELRYDFSALRPA
DGGLYREDELNRVVAASRATPGIVAEVIERARERQGVMLFAATVAHAEEILGYLPAGEAA
LITGETASQQREAVIAAFKARRLKFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIV
GRGLRPSPGKRDCLILDYAGNSWDLYAPEVGSPRPASDTEPVQVACPACGHANLYWGRRD
GELVIEHFGRRCQGLIDNQQCDFRFRFKVCGDCGAENDIAARRCHGCDTLLVDADDKLKE
ALRLKDARVLRVSGMQLEATVNGRGLPRLKVTYHDEDGASLSEWFALETPAQRAAFGAVF
LRDHLRAPGIPWRPTSPYEVVAEQRRLRAPDFVVGRKMGRHWQVREKLFDYTGRYRKAEA
AE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgtcgtccactgtctcgccgcctgcccgtcaacctgcgttgcgcccctaccag
cagcaggcggtgaagcgggtcgttgagcactttcgcgcaggccacgagccggccgtggtg
gtgttgcccaccggcagcggcaagtcgctggtgatcgccgagttggcgaggctggcccgg
gggcgggtgctggtgctcgctcacgtgcgtgaactcgtcgtacagaaccatgccaagtac
caggactacgggctcgaggccgatatcttcagcgccggtctcgggctcaaggagagcgcc
cgccaggtggtgttcggctcggtgcagtcggtgatgcgcaacctcgaccgtttcgccgct
ggcgatcacccccgtggcgccttcaccctgctggtgatcgacgagtgtcatcgtgtctcc
atggacgaggattcgagctaccgccgggtgatagaccggctgcgccggcacaatccgagc
ctcaagatcctgggcctcacggcgacgccctaccggctggggcagggattcatctaccac
cgtcaccatcacggcatggtgcgtggtgacgacgactgcttcttccgagattgcgtcttc
gagcaacccctgcgactgatggtcaagcagggctatctggctccaccggcacgtgtcgat
gcggcgcttttcaaggatggtaaagaactgcgctatgatttctcggcgcttcggcctgcc
gacggcgggctatatcgggaagacgagctgaatcgagtggtggctgccagccgtgcgacc
ccgggcatcgtcgccgaagtcatcgagcgtgcccgggagcggcaaggggtgatgctgttc
gccgccacggtggcccatgccgaggagatccttggctacctgccggctggtgaggcggcg
ctgattaccggcgagacggcatcgcagcagcgcgaggcggtcatcgccgcgttcaaggcc
cgacggctcaagttcctggtcaacgtcgcggtgctgaccaccggtttcgatgccccccac
gtcgacctgatcgccatcctgcggcctaccgagtcggtgagcctctatcagcagatcgtc
ggtcgcggcctgcggccttcgccgggcaagcgcgactgtctcattctcgactatgccggt
aattcctgggacctctacgcacccgaggtgggtagcccccgcccggcctcggataccgag
ccggtgcaggtcgcatgccccgcttgcggccacgccaacctctactgggggcggcgcgac
ggcgagctggtcatcgagcacttcgggcgccgctgccaggggctgatcgacaaccagcag
tgcgactttcgctttcgcttcaaggtgtgtggcgactgcggcgcggagaacgatatcgcc
gcccggcgctgccatggctgcgacaccctgctggtggacgccgacgacaagctgaaggag
gcgctgcgcctgaaggatgcccgggtgcttcgcgtcagtggaatgcagctcgaggcgacc
gtgaacggccgtggcctgccgcggctcaaggtgacctaccatgacgaggacggggcgagc
ctgagtgaatggttcgccctggagaccccggcccagcgcgccgccttcggcgccgtgttc
ctgcgcgaccacctgcgcgcgcccggaatcccctggcgtccgacttccccgtatgaggtg
gtggccgagcagcgtcgcctgcgggcaccggacttcgtggtggggcgcaagatgggccgc
cactggcaggtgcgtgagaagctgttcgactacaccgggcgctatcgcaaggctgaggcg
gcggaatag
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