Halomonas chromatireducens: LOKO_00962
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Entry
LOKO_00962 CDS
T04292
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hco
Halomonas chromatireducens
Pathway
hco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOKO_00962 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_00962 (xseB)
Enzymes [BR:
hco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LOKO_00962 (xseB)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LOKO_00962 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DAHL
SDH_beta
KxDL
OEP
Motif
Other DBs
NCBI-ProteinID:
AMD00039
UniProt:
A0A120JVR9
LinkDB
All DBs
Position
complement(1019456..1019755)
Genome browser
AA seq
99 aa
AA seq
DB search
MAERDKQPSSETMASDEAGADFATTVERLEQLVERLESGELSLEGSLAAFEQGVRLTRDA
QRRLDEAELRVRTLVEGPEGGVDFDSFSAPSEEEADSER
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgagacaagcaaccgtcgtcagagacgatggcgagcgatgaggccggtgcc
gacttcgccaccaccgtcgagcgactggaacagttggtggagcggctggagtccggcgag
ctgtcgctggagggctcgcttgctgccttcgagcagggagtgcgcctgacccgcgacgcc
cagcgtcgcctcgacgaggccgaactgcgggtgcgaaccctggtcgagggcccggaaggc
ggcgtcgacttcgacagtttcagtgcgccatccgaggaggaggccgatagtgaacgctga
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