Halomonas chromatireducens: LOKO_01120
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Entry
LOKO_01120 CDS
T04292
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00061
Fatty acid biosynthesis
hco00071
Fatty acid degradation
hco01100
Metabolic pathways
hco01212
Fatty acid metabolism
hco02024
Quorum sensing
hco04146
Peroxisome
Module
hco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LOKO_01120 (lcfB_2)
00071 Fatty acid degradation
LOKO_01120 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOKO_01120 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOKO_01120 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hco01004
]
LOKO_01120 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hco04147
]
LOKO_01120 (lcfB_2)
Enzymes [BR:
hco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LOKO_01120 (lcfB_2)
Lipid biosynthesis proteins [BR:
hco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LOKO_01120 (lcfB_2)
Exosome [BR:
hco04147
]
Exosomal proteins
Exosomal proteins of breast milk
LOKO_01120 (lcfB_2)
Exosomal proteins of breast cancer cells
LOKO_01120 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMD00193
UniProt:
A0A0X8HCM6
LinkDB
All DBs
Position
complement(1184485..1186107)
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AA seq
540 aa
AA seq
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MALASQKKALSVIRQAPDELIFERLASELVAELPERLSSRVLINAERLPDRPALVDGHVR
WCYAELGREIEAAVEWLVESGIRPGDRIMTVGENCRALVVLLLAASELSAWVAIVNSRLS
AHEVDSIRDNCQPRRVFYTSEASPEAEAHGLRHGAVAYSHSSLGQLRISALLETAPEPVE
SSGAEQVAAMIYTSGTTGTPKGVMLTHRGILYIASISGGMRHLSPGQRVYGVLPMSHVFG
LSSVCMGSLYNGACLYTVPRFDAAAMLEALDVERITVLQGVPAMYARTLEYLRRQARPLV
APSLSYISAGGSPLDSDTKQRVESTFGLTLHNGYGLTEASPTISQTRIADRFDNNTVGRV
LPLLEYRLEPLDDSGENEQGSDDVGELWVRGPNVMKGYFRQPEATRACLNEEGWLNTGDI
ARFDEDDQLYIVGRSKELIIRSGFNIYPPDVEAVINEHPDVTLSAVVGRQVEGNEEVVAF
VQCEPGATLSEAELHAFIGPRLAPYKRPTRLVMMDALPATASGKILKGRLRDMAGREGAT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgccagtcagaagaaggcgctgtcggtgatccgccaggcgccggatgagcta
atcttcgagcgcctggcaagtgagctggtggctgaattgcccgaacgtctcagcagccgc
gtgctgatcaatgccgaacgccttcccgatcgaccggcgttggtggatggccatgtgcgc
tggtgctacgcagagctgggccgtgagatcgaggccgccgtcgagtggctcgtcgaatcg
ggtatacgccccggtgatcgtatcatgaccgtcggcgagaactgccgtgccctggtggtg
ttgctgctggcggccagtgaactcagcgcctgggtagccatcgtcaactcccgcctttcg
gcgcatgaagtcgactcgatccgcgacaactgccagccacggcgggtcttctacaccagt
gaggcatcgccggaggcagaggcccacgggctgcgtcatggggccgtggcctactcgcac
tcttctcttggtcagttgcggatttccgcgctgctggagactgcgccggagcccgtcgag
agcagcggcgctgaacaggtcgccgcgatgatctatacctcgggaaccaccggcacgccc
aagggcgtgatgcttacccaccgtggcatcctctatatcgcttcgatctccggtggcatg
cggcacctgagtcctggtcagcgggtctacggcgtgctgcccatgtcccacgtcttcggt
ctgtcgtcggtatgcatggggtcgctgtacaacggggcctgtctctataccgtgccacgc
ttcgatgcagccgccatgctggaagcgctcgatgtggagcgcatcacggtgttgcaggga
gtgccggccatgtatgcccgcaccctggagtatctgcgacgccaggcgcgcccgctcgtt
gcaccttcgctcagctatatctccgccggtggttcgccgttggacagcgacaccaagcag
cgggtggagtcgaccttcggcctgactctgcataacggctacggcctgacggaagccagt
ccgacgatcagccagacacgcatcgctgaccgattcgacaacaataccgtgggtcgggtg
ctgccgttgctggagtatcgcctcgagccccttgatgacagtggagagaacgagcagggc
agcgatgatgtgggtgagctgtgggtgcgcggccccaatgtgatgaaggggtattttcgt
cagcctgaagccacacgggcctgcctgaacgaggagggctggctgaacaccggtgatatc
gcccgcttcgacgaggacgaccagctttacatcgttggtcgcagcaaggagttgatcatc
cgctccgggttcaacatctacccgcccgatgtggaggcggtgatcaacgaacacccggat
gtgaccctgtcggccgtcgtggggcgccaggtcgagggaaatgaggaagtcgtcgccttc
gtccagtgcgaacctggcgcgacgctcagcgaggccgagctgcacgcattcatcggtccg
cggctggcgccctacaagcggccgacgcgcctggtcatgatggatgcgctgcctgccact
gccagcggaaagattctcaagggtcgcctgcgcgacatggctggacgggagggggcaaca
tga
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