Halomonas chromatireducens: LOKO_01148
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Entry
LOKO_01148 CDS
T04292
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hco03019
]
LOKO_01148
Messenger RNA biogenesis [BR:
hco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LOKO_01148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_21
AAA_22
AAA_29
SKI
AAA_23
mTERF
Motif
Other DBs
NCBI-ProteinID:
AMD00221
UniProt:
A0A0X8HCR4
LinkDB
All DBs
Position
complement(1214823..1215743)
Genome browser
AA seq
306 aa
AA seq
DB search
MQLVIISGRSGSGKSIALQALEDLGYYAIDNFPAMLLGSLVEELPSGPSGQSSIAVSIDS
RNLPHALERFPRLLEELRARKIDCQVIYLTTDARILIERYSATRRRHPMTRGSDMTLGEA
IESEDATLSDIRNLADLIIDTSRLSVHDLRGRITDQVASHRPDQLTLTVESFGFKGGVPL
DADIVFDARCLPNPYWDPRLRSATGREPSIVEFLEQYPLVGEMLDDIIGWIERWLPAYRS
SHRSYLTVAIGCTGGQHRSVYLAERLAHHLAQLQPDVRLRHRELGIHTPVSPSPQDAPGK
PERKES
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgtgatcatcagtggccgttccggctccggcaagtcgatcgcactgcaggcg
ctcgaagacttgggctactacgccatcgacaactttccagcgatgctgctgggatcgctg
gtagaagaactgcccagcggaccgtccggccaatcctccattgctgtcagcatcgactca
cgcaacctcccccatgccctggagcgcttcccccgtctgctcgaggagctgcgcgcccgc
aagatcgattgccaggtcatctacctcaccacagatgcaagaattctgatcgagcgatac
tcggccacacggcgacgccatccgatgacacgtggcagcgacatgacgctgggagaggca
atcgagtcggaagacgccaccctgagcgacattcgcaacctggccgacctgatcatcgac
acctcccggctttcggtccatgacctgcgaggccgcatcaccgaccaggttgccagccat
cggcccgatcagttgacgcttaccgtcgagtccttcggcttcaagggaggggtgcccctt
gatgcggatatcgtctttgatgcccgctgcctgccaaacccctactgggacccgcggctg
cgttctgccaccggccgcgagcccagcatcgttgagttcctggagcagtatccgctggtg
ggggagatgcttgacgacatcatcggctggatcgagcgctggctccccgcctatcgcagc
agccacagaagctatctcaccgtcgccatcggctgcaccggtggacagcatcgctcggta
taccttgccgaacggctggcacaccacctggcccagctgcagcctgacgttcgcctgcgc
caccgagagctcggcatacacacgccggtctccccctcaccacaggacgctccgggaaag
cctgaacgcaaggagtcgtaa
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integrated database retrieval system
