Halomonas chromatireducens: LOKO_01260
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Entry
LOKO_01260 CDS
T04292
Name
(GenBank) RlpA-like protein precursor
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hco01011
]
LOKO_01260
Enzymes [BR:
hco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LOKO_01260
Peptidoglycan biosynthesis and degradation proteins [BR:
hco01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LOKO_01260
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF7537
SOBP
Motif
Other DBs
NCBI-ProteinID:
AMD00328
UniProt:
A0A0X8HCW7
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All DBs
Position
1318260..1319264
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AA seq
334 aa
AA seq
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MKPWYLGLALATLLAGCAGGGGSPPSGEREASRSVPSSAPTGGGRYAMSGDAYPENPPDV
SKIPDAVPRVEPLSRGGNRSTYEVWGKTYRVLPDASGYARQGTASWYGEKFHGYATSNGE
IYDMYKMTAAHRSLPLPTYARVTSLENGRSVIVRVNDRGPFHNDREIDLSYAAAARLDIL
DRGTGRVKVEAIDPERWLAENGRNGENRTASSAVQSSPAAEARTIQAEPAQQAVSAPASG
SAQAVSASSQGTTEPAVDQAAIYLQIAALGSVDNAQALKARLDGELSHPVRVADSAGMYR
VQVGPLSSATQVEPARAELRRAGFDQAFIVNGAD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctggtatctcggcctggcactggccacgctgctggccggctgtgccggtggc
ggtggttcaccgccctcgggcgagcgtgaggcttcgcgtagcgtaccctcgtcggcaccc
accggcggtgggcgctatgccatgagtggcgatgcctatcccgaaaacccaccggacgtc
agcaagatcccggatgcggtgccccgtgtcgagccactgtcccgaggcggcaaccgttcg
acctatgaggtgtggggcaagacctaccgggtactgccagatgccagcggctacgcccgg
cagggaaccgcttcctggtacggcgagaaattccacgggtatgccacctcgaacggcgaa
atctacgacatgtacaagatgaccgccgctcaccgttcgcttccgcttccgacctatgcc
agggtgacaagtctcgagaacggccgttcagtgatcgtgcgggtcaacgaccggggtccc
ttccacaatgaccgtgagatcgacctttcctatgccgctgctgcgcgcctggatattctg
gatcgcggcactggccgggtgaaggtggaggcgatcgaccccgagcgatggctggcagaa
aatggtcgcaacggcgagaaccggacagcttcgtcggcggtccaatcctcgccagccgcc
gaggctcggacgatccaggcggagccggcccagcaggccgtctccgcaccagccagcggt
tcggctcaggcggtttctgcgtcgagtcaaggcacgacggagcccgccgttgaccaggcc
gccatctatctgcagattgcggccctgggttcggtggacaatgcacaggcgctgaaggcg
aggctcgatggcgagctgtcgcatccggtacgggtggccgactcggccggcatgtatcgg
gtacaagttggacccttgtctagtgctacccaggtcgagccggcccgcgccgaactcagg
cgcgccggtttcgaccaggcgtttatcgtcaatggcgccgactga
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