Halomonas chromatireducens: LOKO_01285
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Entry
LOKO_01285 CDS
T04292
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hco03016
]
LOKO_01285 (truA)
Enzymes [BR:
hco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LOKO_01285 (truA)
Transfer RNA biogenesis [BR:
hco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOKO_01285 (truA)
Prokaryotic type
LOKO_01285 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
TetR_C_20
Motif
Other DBs
NCBI-ProteinID:
AMD00353
UniProt:
A0A120JVV3
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All DBs
Position
1347178..1348143
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AA seq
321 aa
AA seq
DB search
MTLFRRLDERTPLSGRLALGVEYDGSAYCGWQRLKNAPSVQAELERALAKVASQPVTVHS
SGRTDSGVHATRQIVHFDPPVPRSQKAWVFGVNANLSRDIAVRWVREVPDDFHARFKALA
RRYRYIILNQPSRPVLERANVTWCRDPLDAEAMHRAAQALVGEHDFSSFRAAGCQSKTPW
RKVHFIEVHRHGPLVVVDVQGNAFLHHMVRNIVGALVTVGRGDRDDDYLAELMALKDRSL
SDVTAPACGLHFVDSLYDDVWELPREPLGPNLLAFLGEWTGERALPDCPMVQFRRGRPVT
EATLEEAALEKATLEEGSFRQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctttcgacgtctcgacgaacgaacccccctcagcggccgcctggccctgggg
gtggaatatgacggtagcgcctactgcggttggcagcgcctcaagaatgctccctcggtg
caggccgaactggagcgggcgctggcgaaggtggccagccagccggtaacggtacactcc
agtggccgcactgactccggcgtacatgccacccgccagatcgttcacttcgacccgccg
gtaccgcgctcccagaaagcgtgggtgtttggcgtgaatgccaacctgtcgcgggacatt
gcggtgcgctgggtgcgtgaagtgcccgatgactttcatgcgcgcttcaaggcactggcg
cggcgttaccgctacatcatcctcaatcagcctagtcggccggtactcgaaagggccaac
gtcacttggtgtcgcgacccgctggacgccgaggcgatgcatcgcgcggcccaggcgctg
gtgggtgagcatgacttctccagtttcagggcggcgggctgccaatccaagacgccgtgg
cgcaaggtgcatttcatcgaggtgcatcggcatggtcccctggtggtcgtcgacgtccag
ggcaacgcctttctccaccatatggttcgtaatattgttggcgccctggtcacggtgggg
cgcggagaccgcgatgacgactacctggcggagctgatggcactcaaggaccgttcgctc
tccgacgttacggccccggcctgtggcctgcacttcgtcgattcgctctatgacgacgtc
tgggagctaccccgggagccactggggcccaacctgctggcgttcctgggcgagtggacc
ggtgagcgggcgcttcccgactgccccatggtccagttccggcgtggaaggccggtgaca
gaggctacgttggaagaggctgctttggaaaaggctacgttggaagaaggtagctttcgg
cagtaa
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integrated database retrieval system
