Halomonas chromatireducens: LOKO_01298
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Entry
LOKO_01298 CDS
T04292
Symbol
msbA_2
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hco
Halomonas chromatireducens
Pathway
hco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOKO_01298 (msbA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hco02000
]
LOKO_01298 (msbA_2)
Enzymes [BR:
hco01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LOKO_01298 (msbA_2)
Transporters [BR:
hco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LOKO_01298 (msbA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
nSTAND1
DUF87
AAA_30
AAA_25
RsgA_GTPase
SRP54
Motif
Other DBs
NCBI-ProteinID:
AMD00366
UniProt:
A0A120JVW0
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All DBs
Position
1361139..1362896
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AA seq
585 aa
AA seq
DB search
MTRPGTQDSGWTLYKRLLGYVKPHWVSFGLAIVGYAIYAASSTALAEMMKRLIDGIQSPD
AAFRLFLPLFVVGMFAARGLGTFLGTYFMSNVARNVVHALRCDVFNHMLHLPGRFFDSHS
SGHLISRVTYHVEQVTGAATKAVTIVLREGLFVIGLLGYLMWTNWMLTLLFMTVTPLIAG
VVRYASKRFRRISQRIQHSMGDVTHVASEALSGYRVVRTHGAEEYEKARFAEASNYNRQQ
SMKEALTKAISTPVIQLLVALSLAVLVWLAMSPALLDDMTPGEFVAFITAASLMAKPVRQ
LTEVNSEIQKGIAAAAELFGLLEVPPERDEGTREPGRLEGQVELQDVHFRYGDDQPEVLK
GIDVTVKAGEMIAIVGRSGSGKSTLVGLLPRFYRPTAGRVLIDGVPIDEYRLAPLRRQIG
LVSQQVTLFNASIADNIAYGVPDADPAAIEAAARAAHAHEFIEPLSQGYDTVVGDNGVML
SGGQRQRLAIARAIFKDAPLLILDEATSALDTESERYIQQALETVCRGRTTLVIAHRLST
IERADRILVMEQGRIVEQGSHDQLLARDGAYAALHRLQFQETPTP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgacccggtacccaagattcgggctggaccctatacaagcgcctgctgggctat
gtgaagccccactgggtttcctttggcctcgccattgtcggctatgccatctacgccgct
tccagtaccgccctggcggaaatgatgaagcgcctgatcgatggtatccagagcccggac
gccgcctttcgtctttttctgccgctgttcgtggtcggcatgtttgccgcccgggggctg
ggtacctttctcggcacctatttcatgagcaacgtggcgcgtaacgtggtgcatgcgctg
cgctgcgatgtgttcaaccacatgttgcatctgccgggccgcttcttcgattcccactcc
agcggccatctcatctcccgggtcacctatcatgtcgagcaggtgaccggagcggcgacc
aaggcggtcaccatcgtgttgcgtgaaggactgttcgtcatcggcctgttgggctacctg
atgtggaccaactggatgctgacgctgctcttcatgaccgtgactcccctgatcgcggga
gtagtgagatatgcgagcaagcgcttccggcgcatttcacagcgtatacagcactccatg
ggcgacgttacccacgtggcatcggaggccctttccggctatcgcgtggtgcgaacccac
ggggccgaggagtatgaaaaggcccgcttcgccgaggccagcaactacaatcgccagcag
agcatgaaggaggccttgaccaaggccatcagcacgcccgtcatccagctgctggtggcg
ctgtcgctggcggtgctggtctggctggcgatgtccccggccctgctcgacgacatgacc
cccggtgaattcgtcgccttcatcaccgctgcctcgttgatggccaagccggtgcgtcag
ctcaccgaggtcaacagcgagatccagaagggcatcgccgccgcggcagagctgttcggg
ctgctcgaagtgcctcccgaacgcgatgaaggcacccgagagccgggacggctcgagggg
caggtggagctgcaggacgtgcacttccgctatggcgacgaccagcccgaggtactcaag
ggcatcgacgtgacggtcaaggccggtgagatgatcgccatcgtggggcgttcgggaagt
ggcaagtcgaccctggtggggctgctgccgcgcttctatcgtcccactgcggggcgcgtg
ctgatagacggcgtgcccattgacgagtatcggctggcgccgctgcgacgccagatcggc
ctggtctctcagcaggtcaccctgttcaatgccagcatcgccgacaatatcgcctacggc
gttccggatgcggacccggctgccatcgaggccgccgctcgggcggcccatgcccacgag
ttcatcgaaccgctgtcccagggctatgacactgtggtaggcgacaacggagtcatgctc
tccggcggccagcgtcagcgactggccatcgcccgggctatcttcaaggatgcgccgctg
ctgatcctcgacgaggccacgtcggcgctggacaccgagtcggagcgctatatccagcag
gcgctggagacggtgtgccggggccggaccactctggtcatcgcccatcggctctccacc
atcgagcgggccgatcgcatcctggtcatggagcagggccgtatcgtcgaacagggttcc
cacgatcagttgctggcccgagacggtgcctatgccgctctccaccggctgcagttccag
gagaccccgacgccatga
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