Halomonas chromatireducens: LOKO_01526
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Entry
LOKO_01526 CDS
T04292
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hco03000
]
LOKO_01526 (gabR)
Transcription factors [BR:
hco03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LOKO_01526 (gabR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
HTH_41
HTH_24
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AMD00594
UniProt:
A0A109ULJ7
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Position
1603217..1604782
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AA seq
521 aa
AA seq
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MKASEPGAIGSLRKSGAVKGVPSSGYALLEQADGLSDALGLALGKPSTQPLTSRLYHALR
EWIQAGRLVSGQRLPSTRQLAQELGLGRNTVLAAFDQLLAEGFLVTRQGPGTFVADLPFQ
HEPTADTASSPSAVDGRVNLSTRGTALLAYCPAQQGRHPAFVPGVPALDRFPHARWQRLV
RRHLQHMPMDWLAYQVQGGVPSLREALADYLQLSRSVRCRPEQILIVQGAQQGFELIVRL
LSDSGDEVWLEEPGYHGAQACFAAAGLDMQPVPVDGEGMQIEALDDSGHPRLIYVTPSHQ
YPSGVTMSLARRLALLEAAERHGAWIVEDDYDSEFRYGQRPVAALQGLVEDARVIYVGTF
SKVMYPGLRLGYLVLPEPLVEPFRRAHARIHREGQYTVQAALAEFIARGHFSRHVRRMRD
CYCRRQALLREALAPAVTRGLRLSEGQAGMHLVAWLDDVEHERHLVDRAAGEGISLSPLS
SYYLDAPGRPGLVLGYAGTVEDEIERAGRWLAQTWCELTSD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaagcgagccgggcgcaatcgggtcgttgcggaagagcggggccgttaagggc
gtgccgtccagcggatatgctctgctggaacaggctgacggactgtccgatgcgttgggc
ctggcgctgggcaagccatcgacacagcccttgacctcgcgcctctaccacgccctgcgc
gaatggattcaggcggggcggctggtcagcggccagcgactgccctccacccgacagctg
gcccaggagctgggcctggggcgcaatacggtactggccgccttcgaccagctgctggcc
gaaggcttcctggtaacccgccaggggccgggcacattcgttgccgacctgccgttccag
catgagccgacggctgacaccgcgtcatcgccatcggcagtggatggcagggtgaacctc
tccacacgtggtacggcgttgcttgcctactgtcctgcccagcaagggcgccaccctgcc
ttcgttcccggcgtgccggcgctggaccgctttccccatgcccggtggcagcgtttggtg
cgccgtcacctgcaacacatgcccatggattggctcgcctatcaggttcagggcggtgtt
ccgtcgctgcgcgaggcgctggccgactatctgcagctgtcacgctcggtgcgctgtcgc
cccgagcagatcctgatcgtgcagggggcccagcagggcttcgaactgatcgtgcgactg
ttgagcgacagcggcgatgaggtatggctcgaggagccgggctaccatggcgcccaggcc
tgtttcgcggcggcggggctcgatatgcagccggtgccggtagacggtgagggcatgcag
atcgaggccctcgacgattcggggcatccgcggctgatctacgtgacaccctcgcaccag
tatcccagcggcgtgaccatgagtctcgcccggcggctggcgttgctggaagccgccgag
cgacacggggcctggatcgtggaggacgactacgacagtgagtttcgctatggccagaga
cctgttgccgctcttcaggggctggtggaagacgcgcgggtcatctatgtgggcaccttc
agcaaggtgatgtaccccggcctgcggctgggctacctggtgctgccggagccgctggtc
gagccgtttcggcgggcccatgcccgaatccatcgcgaggggcagtacaccgttcaagcc
gccctggccgagttcattgctcggggccatttttctcgccatgtgcgtcgcatgcgcgac
tgctactgcaggcgccaggccctgctgcgcgaggccttggcaccggccgtgacgcgtggc
ttgcggctatccgaagggcaggccggcatgcacctcgtggcctggctcgacgatgtcgaa
catgagcgccacctggtcgatcgagcggcgggcgagggcatctcactgtcgccgctgtcg
agctattatctcgatgcccctgggcgtcctggactggtgctgggctatgccggtactgtt
gaagacgagatcgaacgagccggtcgctggttggcccagacgtggtgtgaattgacaagc
gactag
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