Halomonas chromatireducens: LOKO_01786
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Entry
LOKO_01786 CDS
T04292
Symbol
cynR_1
Name
(GenBank) HTH-type transcriptional regulator CynR
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hco03000
]
LOKO_01786 (cynR_1)
Transcription factors [BR:
hco03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LOKO_01786 (cynR_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
TPR_9
MarR_2
HTH_24
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AMD00854
UniProt:
A0A0X8HE04
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Position
complement(1894156..1895067)
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AA seq
303 aa
AA seq
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MNPSIQQLRAFVAVAHSRSLAEASERIHLSQPAISIAIRKLEETVGGPLFSRSTRQLTLT
PEGDAFLPVAVRLLNDWNEAFADLGERFSKQRGKVTVAALPTLAAGLLPGIIADFHARYP
RINLSLHDVLAEQVNQMVREGRADMGLSVSPQDAEDLVFEPVLVDRYVAVCPLGHPLLAQ
ASVEWAQLARQPFIGINRLSSSRQDIDRIMMEVGQPLDIICDASQIATVGRMVAAGLGIS
VLPSLSFRQIASEGIDHRPLVTPTIRRELGIVMRRRDALSAAAAALHAMIQASATPAEAV
SSP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcattcaacagctcagggccttcgttgccgtcgcccactcccgcagcctg
gccgaggccagcgagcgcattcacttgtcccagccggccatctccatcgccattcgcaag
ctggaagagacggtgggcggcccgctgttctcacgcagcactcgccagttgacgcttacc
ccggaaggtgacgccttcctgccggtagccgtgcgcctgctcaacgactggaacgaagcc
ttcgccgacctcggcgaacgcttctccaagcagcgcggcaaggtcaccgtggcggcattg
cctacgctggccgccggcctgctgccgggaatcatcgcagactttcacgcccgctacccg
cgcatcaacctgagccttcacgacgtgctggccgagcaggtaaaccagatggtgcgcgag
gggcgcgccgacatggggctgtcggtgtcgccccaggatgccgaggatctcgtcttcgag
ccggtgctcgtggaccgttatgtggcggtctgccccctgggacacccgctgcttgcgcag
gcaagcgtcgagtgggcgcagctggcaagacagccattcatcggcatcaatcgtctttcc
agctcacgccaggatatcgatcgcatcatgatggaagtgggccagccactggatatcatc
tgcgatgccagccagatcgccacggtaggacgcatggtggccgccggcctgggaataagc
gtgctgccttcgctcagctttcgccagatcgcctcggagggtatcgaccaccgccccctg
gtgacgccgaccatccgtcgcgaactggggatcgtgatgcgccggcgcgatgccctctcg
gcggccgccgcggcgctccacgccatgatccaggcaagcgcaacgccagcggaagccgtc
tcttcgccataa
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