Halomonas chromatireducens: LOKO_01961
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Entry
LOKO_01961 CDS
T04292
Symbol
apxIB
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
hco
Halomonas chromatireducens
Pathway
hco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOKO_01961 (apxIB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hco02000
]
LOKO_01961 (apxIB)
02044 Secretion system [BR:
hco02044
]
LOKO_01961 (apxIB)
Transporters [BR:
hco02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LOKO_01961 (apxIB)
Secretion system [BR:
hco02044
]
Type I secretion system
Adhesin protein transporter
LOKO_01961 (apxIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AMD01028
UniProt:
A0A120JW29
LinkDB
All DBs
Position
complement(2078052..2080172)
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AA seq
706 aa
AA seq
DB search
MRDELLACLQSIALAHDHGVTAESLTAGLPLEDGRLTPGVFPRAASRAGMTARIVKSRLV
QLNPALFPVVLLLEPGRACVLVALDIKARQAKVIFPELGDAVTDVKLDGLLDSYSGQAIY
VRPRFRFDERGPEVKKQRARHWFWGVIRENRKLYRDVIIGSFLINLFAVAMPLFVLNVYD
RVVPNQATETLWVLAAGIFVVLCFDLVLRLMRNAFVDLAASRADVKLSSSIMARVLGLRM
ESRPASTGSFAATLQSFESIRAFIGSATVVSLVDLPFVLLFAGIIALIGPPLVLPVIVGI
LFVLLYAMAAQGKLHELSETTWRIGAQRNATLVESISHLETVKTLRAESRIQGSWEKASA
FLSRTAAQLRLVSSSVTSVAQWAQHSVAVCVIIIGVYLIIDGQLTQGGLIAAYLLSSRAM
APVSQAAALLAQYHQSSTALQSLNGVMERPVERPEGKQFISRPVIRGEIRFDKVTLRYPD
EERDALRDISLKIEAGEKVALLGRVGGGKSTLNKLMLGLYQPTGGAVLVDGVDIRQFDPI
QLRRHIGYVPQDVSLFFGSLRDNVVAGGGSDGVDDEALLRAIELAGLQGLVNSHPHGVDL
QVGERGQSLSGGQRQAVAIARALVHDPQILLLDEPSSAMDHASEETFKANLKTYAKGKTM
VVVTHRTSLLSLVDRIIVIDAGKVVADGPRDKVVEALRKGQIGRAS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgatgaactgctcgcctgcctgcaaagtatcgcccttgcccatgatcatggtgtt
acggccgagtccctcacggcgggcctgccgctcgaggatggcaggctgacgccgggtgtc
tttccccgtgccgcaagccgggcaggtatgacggcaagaatcgtcaagagtcgcctggtg
caactcaacccggccctctttcctgtcgttctgctgctcgagccgggacgggcctgcgtg
ctcgttgccctggatatcaaggcgcggcaggcaaaggtgatcttccccgaactgggggat
gccgtcaccgacgtgaagctcgatggcttgcttgacagctacagtggccaggccatctat
gtacgtccgcgtttccgtttcgacgagcgtggcccggaagtgaagaagcagcgggcgcgc
cactggttctggggtgtcattcgcgagaatcgcaagctctaccgcgatgtcattatcggc
tccttcctgatcaatctctttgcggtggcgatgccactttttgtgctcaatgtctacgat
cgagtggtgcccaaccaggcgacggagacgctctgggtgctggcagccgggatcttcgtc
gtgctctgcttcgacctggtgctgcgcttgatgcgcaacgccttcgttgatcttgctgcc
agtcgggccgacgtaaagctttcctcctccatcatggcccgggtattgggcctgcgcatg
gagtcccggccggcttccactggctccttcgcggccacgctgcagtccttcgaatcgatt
cgggccttcatcggctcggcaacggtggtctccctggtcgacctgccgttcgtgctgctg
tttgccggcatcattgcactgatcggcccgccattggtgctgcccgtgattgtcggcatc
ctgtttgtcctgctctatgccatggcggcccagggcaagctacatgaactgtccgaaacc
acatggcggatcggtgcgcagcgcaatgccacgctggtagagtcgatctcgcacctggaa
accgtcaagactctgcgtgccgagagccgtatccagggatcctgggagaaggcgagcgcc
tttctgtcgcgcaccgcggctcagttacgcctggtcagctcttcggtcaccagcgtggcg
caatgggcgcagcatagcgttgccgtctgcgtgatcatcatcggcgtctacctgatcatc
gatggacagctgacccagggggggctgatcgccgcctatctcctctcctctcgggccatg
gcgccggtcagccaggcagcggcgctgttggcgcagtatcaccagtcatccacggccttg
cagtcgctcaatggggtgatggagcgaccggtggagcggccggaaggcaagcagttcatc
agccggcccgttattcgcggtgaaatccgcttcgacaaggtgacgctgcgctatccggat
gaagagcgcgatgcgctgcgcgatatctcgttgaagatcgaggccggcgaaaaggtggcc
ttgctggggcgggtagggggtggcaagtcgacgctgaacaagctgatgctgggcctctac
cagcccaccggcggggccgtcctggtcgatggggtggacattcgacagttcgaccctatc
cagctgaggcgccatatcggttatgtaccccaggatgtgagcctcttctttgggtcgctg
cgtgacaacgtggtggcgggcggcggtagcgatggggtggacgatgaagcgctgctgcgt
gcgatcgagctggccggcctgcagggcctggtcaactcgcacccccacggcgtggacctg
caggtgggcgagcgcggccagtcgctatccggcggccagcgccaggccgttgccattgct
cgcgcgctggttcacgacccccagatactgctgctggatgagccgtccagtgccatggat
catgccagcgaggagaccttcaaggcgaacctgaagacctatgcaaagggcaagaccatg
gtcgtcgtcactcaccgaacgtcgttgctgtcgctggtcgaccgcatcatcgtcatcgac
gccggcaaggtggtcgccgatggtcctcgcgacaaggtggtcgaggccttgcgcaaggga
cagatcgggagggcaagctga
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