KEGG   Halomonas chromatireducens: LOKO_02079
Entry
LOKO_02079        CDS       T04292                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hco  Halomonas chromatireducens
Pathway
hco03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hco00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LOKO_02079 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hco03019]
    LOKO_02079 (rnc)
   03009 Ribosome biogenesis [BR:hco03009]
    LOKO_02079 (rnc)
   03036 Chromosome and associated proteins [BR:hco03036]
    LOKO_02079 (rnc)
Enzymes [BR:hco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LOKO_02079 (rnc)
Messenger RNA biogenesis [BR:hco03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LOKO_02079 (rnc)
Ribosome biogenesis [BR:hco03009]
 Eukaryotic type
  90S particles
   RNase
    LOKO_02079 (rnc)
 Prokaryotic type
  rRNA processing factors
   LOKO_02079 (rnc)
Chromosome and associated proteins [BR:hco03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LOKO_02079 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: AMD01145
UniProt: A0A0X8HEP0
LinkDB
Position
complement(2210768..2211460)
AA seq 230 aa
MSNSLNAFSRRIGHTFRDDALLELAMTHRSFGGQNNERLEFLGDSIVNFVIAEALYQRFP
QAREGQLSRLRARLVRGQTLAELAREMSFGECLRLGSGEMKSGGHRRDSILADAVEAVLG
AIYLDAGMDVARTRVLAWYAERLEAIDLQDTQKDPKTRLQEFLQSRQVPLPRYEVVSVEG
EAHDQTFTVECHIELLNEHTLGIGASRRHAEQQAAEMALSQIETLGGRGK
NT seq 693 nt   +upstreamnt  +downstreamnt
gtgagcaactccctcaacgccttcagccgacgcatcggtcacaccttcagggatgacgcc
ctgttggagctggccatgactcatcgcagcttcggcggccagaataacgaacgactcgag
tttctcggtgactccatcgtcaatttcgtgatcgccgaagcgctctaccagcgttttccc
caagcgcgggaaggccagctatcacggctgcgtgccaggctggtacgtggtcagacgctg
gctgaactggcccgggagatgtccttcggcgagtgcctgcgactcggctccggtgaaatg
aagagcggcggtcatcgccgtgactccatcctcgccgatgccgtcgaggccgtgcttggc
gccatctacctggatgccggaatggatgtggcacggacccgggtgctggcctggtacgcc
gaacgcctggaggccatcgacctgcaggacacccagaaggaccccaagacacggctccag
gagtttctgcagtcgcgccaggtacccttgcctcgctatgaagtggtatcggtggaaggg
gaggcgcatgaccagacttttaccgtggagtgtcatatcgaactgctaaacgaacacacc
ctgggaattggagccagccggcgtcatgctgaacagcaggcggcggagatggcgttgtct
cagatcgagaccctgggagggcgtggtaaatga

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