Halomonas chromatireducens: LOKO_02123
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Entry
LOKO_02123 CDS
T04292
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hco
Halomonas chromatireducens
Pathway
hco03030
DNA replication
hco03430
Mismatch repair
hco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOKO_02123 (dnaQ)
03430 Mismatch repair
LOKO_02123 (dnaQ)
03440 Homologous recombination
LOKO_02123 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hco03032
]
LOKO_02123 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_02123 (dnaQ)
Enzymes [BR:
hco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOKO_02123 (dnaQ)
DNA replication proteins [BR:
hco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOKO_02123 (dnaQ)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOKO_02123 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMD01186
UniProt:
A0A0X8HEK0
LinkDB
All DBs
Position
complement(2252223..2252981)
Genome browser
AA seq
252 aa
AA seq
DB search
MRQIVLDTETTGIDPKEGHRLIEIGAVELVNRRLTGQTYHQYINPQREIEAEAIAVHGIT
NDDLDDKPVFAEIADAFWDFIVGAELVIHNAAFDVGFIDHELMMLHAQRPEPRLGPVAEH
CSILDTLRLARDRHPGQRNNLDALCKRYEIDNGRRVLHGALLDAEILAEVYLAMTGGQTA
LTLDAEERRADDAMAGGLSIRRLSSTASLSVLRPGAEELVAHQAKLEQIRQAAGSCHWDE
LASARDLAEKSS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattgtactggatacggaaacaaccggtatcgaccccaaggaagggcaccgg
ctgatagagatcggtgccgtggagctggtgaaccgccgccttaccggacagacctaccat
caatacatcaatccgcagcgcgaaatcgaggccgaagccatcgcggtccatggcatcacc
aacgacgacctggacgacaagccggtattcgccgagatagccgatgcgttctgggacttc
atcgtcggtgccgaactggtgattcataacgcggccttcgatgtgggcttcatcgatcac
gaactgatgatgctgcacgcccagcgccctgagccacgccttggcccggttgctgagcac
tgctccattctggacactctgcgtctggctcgtgaccgtcacccagggcagcgcaacaac
ctcgatgcgctatgcaagcgctacgagatcgacaacggccgccgtgtactccacggggcc
ctgctggatgccgagatcctggccgaggtctacctcgccatgaccggcggccagacggcc
ctgacactggatgccgaagagcgacgtgccgatgacgccatggccggggggttgtcgatt
cggcgtttgtcatcgacggccagcctgagcgttctgcgccctggcgcggaggagttggtc
gcccatcaggccaagctcgagcagatccgtcaggctgctggctcttgccactgggatgag
cttgcctcggcacgtgatctcgcagaaaagtcgagctga
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