Halomonas chromatireducens: LOKO_02150
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Entry
LOKO_02150 CDS
T04292
Symbol
uvrD_1
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hco
Halomonas chromatireducens
Pathway
hco03420
Nucleotide excision repair
hco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOKO_02150 (uvrD_1)
03430 Mismatch repair
LOKO_02150 (uvrD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_02150 (uvrD_1)
Enzymes [BR:
hco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOKO_02150 (uvrD_1)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOKO_02150 (uvrD_1)
MMR (mismatch excision repair)
Other MMR factors
LOKO_02150 (uvrD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
AMD01213
UniProt:
A0A0X8HEK2
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All DBs
Position
complement(2285508..2287697)
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AA seq
729 aa
AA seq
DB search
MVTHGAGHARVAAVAGAGKTTTLVARVLHLLASGVPANRILVLMFNRSAREDFQQRLATM
APRGQRLPDVRTFHALGHRLTGSLARWGVLPERRLLSADWQVERLLRQATLEVLEDPTQR
ETALEADTLEALAHFCGLVKAEMLAPAALYERLDFGDETRHFVEAFQRLEQLLAEHGLMT
FSDLLYRPLRALEADPQLAKRVQGYLDHVIIDEYQDINQAQLRLLATLAGAEADVMAVGD
ANQCIYEWRGAHPDAMREHFTATFGAAIDYPLSTTFRHGHALALTANHAIAANRRRPDQL
CLAAPENPRTTLAVDQGREALPQALAAWQGEGRRLDEACLLVRSWALSVPFQLRLLQAGI
PFRLSREDRFVFRLPLVQALSGYLRVARNAALLQDPELVRRLLEQPTPFVARERLSALAS
RLAETQTFPDRHDPLLASLKPIQRRNLKRRWALLCELPRLGLWSPARLLAHVVESLDAEK
VLKRAAARREKGEEDVRLLDVLVEQAGEVKEIDAFIELLERPVENHADGVLITTVHGAKG
LEWPLVVLAGANEEDFPHYSRDNPLTPERLEEERRLFYVAITRARERLLMLHDGGAHRPS
RFLAEMAWQDCTRVAARLEGADSDDDSPLAVTSPALVARYLETLGHEVPLRPLADSVLAE
AQAGYWAGEFQPGQWLRHAVFGEGEIAVVEGDPADPVIEVRFAQAGRRRLLARRAPIEML
SAHLAASPL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggtcacccatggcgccgggcatgcccgggtcgccgccgtggccggggccgggaagacc
accacgctggtggcgcgggtgctgcatctgctggccagtggcgtgcctgccaaccgtatc
ctggtgctgatgttcaatcgctcggcccgggaggacttccagcagcgtctggcgaccatg
gccccccggggccagcggctgcccgatgtgcgcacctttcacgcccttggccaccggctg
accggtagtctggctcgctggggtgtgctgcctgagcgtcgcctgctttccgccgactgg
caagtggagcgcctgctgcgccaggcgaccctggaagtgctggaggacccgacgcagcgc
gagacggccctggaggcggataccctcgaggcgcttgcccacttctgtggcctggtgaag
gccgagatgttggcgccggcggccctctatgagcgcctcgacttcggtgacgagacgcga
cacttcgtggaagccttccagcgcctcgagcaactgctggccgaacacggattgatgacc
ttttccgacctgctctaccggccgctgcgcgcactggaggccgacccgcagctggcgaag
cgtgtccagggctacctcgaccacgtcatcatcgatgagtatcaggacatcaaccaagcg
cagctgcgcctgctggccaccctggccggagctgaagccgacgtcatggccgtgggcgat
gcgaaccagtgcatctacgagtggcgtggcgcccatcccgacgccatgcgcgaacacttc
accgccaccttcggcgcggccatcgactaccccctttccaccaccttccgccacggccat
gcgttggcgctgacggccaaccacgccatcgccgccaaccgtcgcaggcccgaccagctc
tgccttgccgctccggagaacccacgcactaccctggccgtcgatcagggcagggaggca
ttgccccaggcgctcgccgcctggcagggtgaggggcgtcgtctcgacgaggcttgcctg
ctggtgcgcagctgggcgctgtcggtgcctttccagctgcggctgctccaggcgggcatt
ccctttcggctctcccgcgaggatcgcttcgtgttccggctgccgctggtgcaggccctg
tccggctacctgcgggtggcgaggaatgccgccttgctgcaggaccccgaactggtgcgc
cggctattggagcagccgacccctttcgtggcccgggagcgcctgtcggcgttggccagc
cgactggcggagacgcagacctttcccgaccgacacgatccgctgctggccagtctcaag
ccgatacagcggcgtaacctcaagcggcgctgggccctgctctgcgaactgccgcgcctg
ggcctctggtcccccgctcgcctgctggcccatgtggtggagagtctcgacgccgagaag
gtgctcaagcgcgccgccgcacgccgagagaagggcgaggaggacgtccggctactcgat
gtgctggtggaacaggccggtgaggtgaaagagatcgatgccttcatcgaattgctggag
aggccggtggagaaccacgccgacggcgtcttgatcactacggtacacggcgccaagggg
ctggagtggccgctcgtggtcctggccggggccaatgaggaggattttccccattacagc
cgcgacaacccgctgaccccggagcggctggaagaggagcggcggctcttctatgtggcc
attacccgcgcccgggagcggctgctcatgctgcatgatgggggagcgcatcgcccgagt
cggttcctcgccgagatggcctggcaggattgtacgcgggtggctgctcgcctggagggc
gccgacagcgacgacgactctccgctggccgtcacctcgccagcgctggtggcccgctat
ctcgagacgctgggccatgaggtgccgcttcggccgctggccgactcggtcctggccgaa
gcgcaggccggctattgggcaggcgagttccagccggggcagtggctgcggcatgcggtc
tttggtgaaggcgagattgccgtggtggagggcgacccggccgacccggtcatcgaagtg
cgctttgcccaggcggggcggcgccgcttgctggcgcggcgtgcccccatcgagatgctg
tccgcgcatctggcggcttcgcccctctga
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