Halomonas chromatireducens: LOKO_02324
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Entry
LOKO_02324 CDS
T04292
Symbol
ybbH_2
Name
(GenBank) putative HTH-type transcriptional regulator YbbH
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hco03000
]
LOKO_02324 (ybbH_2)
Transcription factors [BR:
hco03000
]
Prokaryotic type
Helix-turn-helix
Other families
LOKO_02324 (ybbH_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_29
HTH_31
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AMD01384
UniProt:
A0A125R081
LinkDB
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Position
2460556..2461410
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AA seq
284 aa
AA seq
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MANHDLLQRIRQRLEELNRSERKVADVILADPTRATGLSIASLAQAASVSEPTVNRFCRS
FDAKGYPDFKIKLAQSLAGGTPYVSQAVEPGDAATEYTSKIFGATIAALDEASRELDPAR
IERVVDYLIQAKQIHFFGLGASGAVAQDAQHKFFRFNLPVTSYVDVLMQRMVAAACHTGD
VVVVISWTGRTRELVDIARLARESGAVVLGITAPGSPLARECTETLEVATPEDTDVYMPM
TSRMIQLTLIDVLATGVTLRRGEDFLPHLKKIKDSLLETRYPVG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcacgacctgctccagcgtattcgccaacgcctcgaagagttgaatcgctcc
gagcgcaaggtcgcagacgtcattctagcggacccgacccgggctaccggcttgagtatc
gccagcctggcgcaggcggcctcggtcagcgaacccaccgtcaatcggttctgtcgcagc
ttcgatgccaagggctacccggacttcaagatcaagctagcccagagcctggcagggggc
acgccctatgtcagtcaggcggtggagcctggcgacgccgctactgagtacacgagcaag
atatttggcgccacgattgccgcactggacgaagccagccgcgaactggaccccgcacgc
atcgagcgggtagtggattatctgatccaggccaagcagatccacttcttcggcctaggc
gcgtcgggagcggtggcacaggatgcccagcacaagttctttcgcttcaacctgcccgtc
acgtcctacgtggacgtgctgatgcagcgcatggtggccgccgcctgccataccggcgat
gtagtcgtagtgatttcctggaccggccgcacccgcgaactggtagacatcgcccgcctg
gcccgagagagtggcgccgtggtattgggtatcaccgcacccggctcgccgctggccagg
gaatgcaccgaaacacttgaggtcgccacgcccgaggacaccgacgtctacatgccgatg
acatcgcggatgatccaactcaccctcatcgatgtcctggccaccggtgtcaccctgcga
cgcggcgaagacttcctgccacacctgaagaagataaaggacagcctgctggaaacgcgc
tacccggtcggctaa
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