Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) Nuclease SbcCD subunit D
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
hco Halomonas chromatireducens
|
Brite |
KEGG Orthology (KO) [BR:hco00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:hco03400]
LOKO_02409 (sbcD)
DNA repair and recombination proteins [BR:hco03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOKO_02409 (sbcD)
Archaeal homologous recombinant proteins
LOKO_02409 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2551596..2552900
|
AA seq |
434 aa
MKLIHTADWHLGQTFHGQERHVEHGAFLDWLLQTLEARQPDALLIAGDVFDVVNPSLRAQ
EQLYGFIVEAHRRLPRLDIVMIAGNHDSGSRIELPGPLMRRLNAHALGRVSWCDDGSLEA
ERLLVPLTDAADETRAWCLALPFLRPAEVTGNRRESATDGEDEGGYIAGIQRVHRELIDA
ARRQRRPGQALVAMSHAHLRGAQVSEHSERPIVIGGEESISAALFPNDIAYVALGHLHRP
QQVGEPRIRYSGSPLPMDFSEANYPHQVVEVTLEGEALVGSESIAIPRAVELLRVGPAPL
DQVLTELEALPREAQEATPEQEASAGGTLPRERWPWLEVRVELDAPRPDLRHRIETALAD
CPVRLLRIHTRFPTATGAGHDPRVTLESLGPRALFERAWQESYGAMPDAETLRDFDALCQ
EVLHQASPSEEGNP |
NT seq |
1305 nt +upstreamnt +downstreamnt
atgaaactgatccacaccgccgactggcacctgggccagaccttccacggccaggagcgc
catgtcgagcatggtgccttcctcgactggctgctccagaccctggaagcgcgacagccc
gacgccctgctgatcgccggcgatgtgttcgacgtggtcaacccctccctgcgcgcacag
gagcagctctacggcttcatcgtcgaggcgcatcgtcgcctgccacggctcgacatcgtg
atgatcgccggcaaccacgacagcggcagccgcatcgaactgcccggcccactgatgcgc
cgcctcaatgcccatgccctcggccgggtgagctggtgcgacgacggcagcctcgaggcc
gagcgcctgctggtgccactgaccgacgccgctgacgagacccgcgcctggtgcctggcg
ctgcccttcctgcgccccgccgaggtcaccggcaaccggcgcgagagcgcgaccgacggc
gaagacgaaggcggctacatcgccggtatccagcgcgtccatcgggagctgatcgacgcc
gcccgccggcagcgccggcccgggcaggcactggtggccatgagccacgcccacctgcgc
ggcgcccaggtctccgagcacagcgagcggcccatcgtgatcggcggcgaggagtcgatc
tcggcggcgctgtttcccaacgacatcgcctacgtggcactgggccacctgcaccgtccg
cagcaggtcggcgagccgcgcatccgctacagcggcagccccctgccgatggatttcagc
gaggcgaactatccacaccaggtggtggaagtcaccctcgagggcgaggccctggtcggc
agcgagtcgattgccattccccgggcggtggaactcctgcgtgtcggccccgctccactg
gaccaggtattgaccgagctggaggccctgccacgcgaggcccaggaagcgacgccggag
caggaagcctcggccgggggcacccttccccgcgaacgctggccctggctcgaggtgcgt
gtcgagctcgacgccccccgccccgacctgcgccaccgtatcgagacggcgctggccgac
tgcccggtgcgcttgctgcgcattcacacccgctttcccaccgccaccggcgccggccat
gatccacgggtaacgctggagagcctgggcccccgcgccctgttcgaacgtgcctggcag
gagagttacggcgcgatgccggacgccgagaccctccgcgacttcgacgccctgtgccag
gaggtgctgcatcaagcgtcacccagtgaggaaggcaatccatga |