Halomonas chromatireducens: LOKO_02449
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Entry
LOKO_02449 CDS
T04292
Symbol
smc_4
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hco03036
]
LOKO_02449 (smc_4)
Chromosome and associated proteins [BR:
hco03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LOKO_02449 (smc_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
AMD01509
UniProt:
A0A125R097
LinkDB
All DBs
Position
complement(2601760..2605254)
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AA seq
1164 aa
AA seq
DB search
MRLTSIRLSGFKSFVDPVTVPFDGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGES
MTDVIFNGSTARKPVGQAAIELRFDNSDGSMGGLYAQYAEIAVKRQVSRDGQSAYFFNGQ
KCRRRDIADLFLGTGLGPRSYAIIGQGMISRLIEARPEELRATLEEAAGISKYKERRRET
ENRMRRTRENLERLDDIRQELDKQLERLRRQAEAARRYQTLKTQEHRLKGELALLRGRAL
RARQGEEEGRVRELETAVEREILGMRQCETRLEEARAGHDRLAEELEACQARFFETTGAI
ARLEQNLEHARSRETQLGRDLESAHRELAELDRLGEEDQARLAGLDERLERLGPEQEEVA
EQLAEMEAMLEDAEPAAEEAELAYEAFSEGWREASRAAERAQDRLRELEERLARLDADEQ
RRRQQQQELPDLAELQARRGEHQERLAEFQLEQESAEARREQLQEQRDTARAAAAALEQG
REGQRARRSVLQGELASLDALIQAALTDPDEALASHLADHGLGDAPRLGESLTVDPGWEA
SVSWVLAPWLKARLATPDTFQAASAAPPAELGALSPDTVGEPQSHSLAARVRGAGAATAW
LEAIRCVESDAQAWGEREGLAAGESLITPQGLWLGRDWIRHRGQGAGPDALLVSRRRRDE
VAAELDEVETRLVAQDAELAVERERVEQAEGALEGVRHDERRLATEHQQLAVQDSGLASR
LEHLQGRAAELVEEVERLRESGEETRLAIEEAREQWQQAMASLEEGAEQRERLERERSQS
RERLASLRARQRPLNDRAQQLALEHQRLSTEREGLAEQQGRAGDVRQRLADRCSELNDAL
EQLREPDEEQRERLDDLLHRREGDERALNEVRGRAAELAERLREDEQARQGHERSLEGIR
ERLQESRMQVQALALKAETQDEQLKELGHEVAALLEVLDPEATESAWQARLEEVAERVRR
LGAINLAAIEEYDQQAERRDYLEAQQAELNEALETLEKAIRRIDQETRTRFRDTFERVNQ
GLQTLFPRVFGGGTAWLTLTGDDLLDTGVAIMARPPGKKNSTIHLLSGGEKALTALSLVF
AIFQLNPAPFCMLDEVDAPLDDANVGRYAKLVKDMSDSVQFIYITHNKIAMEAAERLMGV
TMQEPGVSRLVAVGVEEAAALAEA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcacctcgattcgcctgagcgggttcaagtccttcgtcgacccggtcacggtg
cccttcgatggcaacatgaccgccatcgtcgggcccaacggctgcggcaagtcgaatatc
atcgacgccgtgcgctgggtcatgggcgagtcctcggccaagaccctgcgcggcgaatcg
atgaccgacgtcatcttcaacggctccaccgcgcgcaagccggtggggcaggccgccatc
gagctgcgcttcgacaacagcgacggcagcatgggcggcctctacgcccagtacgccgaa
atcgcggtcaagcgtcaggtctcccgcgacggccagtccgcttacttcttcaacggccag
aagtgtcgtcgccgtgatatcgccgatctcttcctgggcaccggcctgggtccgcgttcc
tacgccatcatcgggcagggcatgatctcgcgcttgatcgaggcgcgtcccgaagagctg
cgcgccaccctggaagaggccgccgggatctccaagtacaaggagcgccgccgggagacc
gagaaccgaatgcggcgcacccgcgagaacctcgagcggctggacgatattcgccaagag
ctcgacaagcagctggagcgcctgcggcggcaggccgaggcggcgcggcgctaccagacc
ctcaagacgcaagagcaccggctcaagggtgagctggcgctcttgcgtggccgcgcgctg
cgcgcacggcagggcgaggaggagggccgtgtccgcgaactggaaaccgcggtggagcgc
gagatcctcggcatgcgccagtgcgagacccgcctcgaggaggctcgggccggccatgac
cgcctggccgaagagctggaagcgtgtcaggcgcggttctttgagaccaccggcgccatc
gcccggctggagcagaacctggagcacgcgcgcagccgggaaacccagctggggcgcgac
ctggagagtgcccatcgcgagctggccgagctggaccgactgggcgaagaggaccaggcg
cggctggcggggcttgacgagcgtctcgagcgcctgggccctgagcaggaggaagtcgcc
gaacagttggccgagatggaggcgatgctggaagacgccgagccggctgccgaggaggcc
gaactcgcctatgaggccttcagcgagggctggcgggaggccagccgcgcagccgagcgc
gcgcaggatcgcctgcgcgaactggaagaacgtctggcacggctggacgccgacgagcag
cgccgccgccagcagcagcaggagctgccggacctggccgagctgcaggcccggcggggc
gagcaccaggagcgacttgccgagttccagctggagcaggagagcgccgaggcgcggcgc
gagcagctgcaggaacagcgcgacacggcccgcgccgccgccgccgcgctggagcaggga
cgcgaaggacagcgtgcccggcgcagcgtgctccagggtgagctcgcctcgctggacgcg
ctgatccaggccgctctgaccgatccggacgaagcgctggcaagccacctggccgaccac
ggcctgggcgatgccccccggctgggggagtccctgacggtcgaccccggttgggaagcc
agcgtctcctgggtgctggcgccgtggctcaaggcgcggctggccacacccgacaccttt
caggccgcaagcgctgcgccgcccgccgaactgggtgcgctctcccctgataccgttgga
gagccgcagtcccatagcctggcggcacgggtgcgcggcgccggagccgctacggcctgg
ctggaggcgattcgctgcgtggaaagcgatgcccaggcctggggggaacgcgaaggcctg
gccgcaggcgagagcctgatcacgccgcaggggctatggctgggccgtgactggatacgc
caccgcggccagggcgcaggccctgacgcgctgctggtcagccggcggcgtcgggatgag
gtcgccgcggagctggacgaggtcgagacccgactggtcgcccaggatgccgaactggcc
gtcgagcgcgagcgggtcgaacaggccgaaggcgccctggaaggcgtacgccacgatgag
cgccgcctggccactgagcatcagcagctggcggtccaggacagcggcctggccagccgg
ctcgagcatctgcaggggcgtgccgctgaactggtcgaagaagtcgagcggctgcgtgag
agcggtgaagaaacgcggctagccatcgaggaggcccgtgaacagtggcagcaggccatg
gcgagcctcgaagagggcgccgagcagcgcgagcggctggagcgcgagcgcagccagagc
cgagagcggcttgcctcgctgcgtgcccgccagcgcccgctcaacgatcgcgcccagcag
ctggcactggaacaccagcggctctccaccgagcgggagggcctggcggaacagcagggg
cgtgccggcgatgtccgccagcgccttgcggaccgctgtagcgaactgaacgatgcgctg
gaacagctgcgagagcccgacgaggagcagcgcgaacgcctcgacgacctgctgcaccgg
cgtgaaggcgacgagcgagcgctcaatgaagtgcgcggccgtgccgccgagctggccgaa
cggctgcgcgaagacgagcaggctcgccagggacacgaacgcagcctggaagggatccgc
gagcgcctccaggagtcacgcatgcaggtccaggccctcgccctcaaggcggaaacccag
gacgagcagctcaaggagctgggtcatgaggttgctgccctgctggaggtgctggacccc
gaggccaccgaatccgcctggcaggcccggctggaggaggtcgccgagcgagtccgccga
ttgggtgcgatcaacctcgccgccatcgaggagtacgaccagcaggccgagcgtcgcgac
tacctggaggcccagcaggctgaattgaacgaggcgctggagacgctggagaaggcgatc
cgacgtattgaccaggaaacccgtacccgttttcgcgacaccttcgagcgggtcaaccag
ggactgcagacgcttttcccccgagtcttcggcggtggaaccgcatggttgacgctcacc
ggggatgatttgctggacaccggcgtggcgatcatggcacgccctcccggcaagaagaac
agcaccattcacttgctctcggggggcgaaaaggcactgactgccctgtccctcgtcttc
gctatctttcagctcaatcctgcccctttctgcatgctcgacgaagtggatgcaccgctg
gatgatgccaatgtgggacgctatgccaagttggtgaaggacatgtcggattcggtgcag
tttatctatatcacccataataagatcgccatggaggcggcggaaaggctgatgggtgtt
accatgcaggagcccggcgtttcacgtctggttgcggtaggtgtcgaggaggccgccgcg
ctggccgaggcctga
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