Halomonas chromatireducens: LOKO_02609
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Entry
LOKO_02609 CDS
T04292
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hco
Halomonas chromatireducens
Pathway
hco03030
DNA replication
hco03430
Mismatch repair
hco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOKO_02609 (dnaX)
03430 Mismatch repair
LOKO_02609 (dnaX)
03440 Homologous recombination
LOKO_02609 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hco03032
]
LOKO_02609 (dnaX)
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_02609 (dnaX)
Enzymes [BR:
hco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOKO_02609 (dnaX)
DNA replication proteins [BR:
hco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOKO_02609 (dnaX)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOKO_02609 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_18
AAA_14
AAA_2
AAA_30
AAA_19
Mg_chelatase
HH_CyaD
nSTAND3
AAA_28
TsaE
NTPase_1
Rad17
NACHT
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AMD01669
UniProt:
A0A109UMD3
LinkDB
All DBs
Position
complement(2779524..2781623)
Genome browser
AA seq
699 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQEHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTAKGHGEEGVTSTPCGECDSCRAIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPPTVLSRCLQFT
LKNMPPERIVEHLAKVLEAEQVGFEESALWLLGKAADGSMRDAMSLTDQAIAFGQGQICH
ADVAAMLGTLDHRHVVALVEALAEVDAARVLNEVSQLAEQGPDFAAVLDDVTGVLHRLAV
AQMVPGALDNGHGDRDLLLALAARFTPEDIQLYYQIGIQGRGDMAHAPDLRTALEMTLLR
MLAFRPQGVPQPAKTPLPLRGEPGPVTPSAAGAGPSGSPPPDEAPAAAGREGAGLPDAAR
GEDGLPDAGDHANLAPTPEPPMAQDRFEAPPPWEEALPEASTAPPTVADGLNQGREAAPR
PAENEKEREREKESEKEGEVAIAAAPAPLSTAEASVVAGPESAVSRPAVIPEPAGVEDLD
SPSASPSSAPAEMLKAGHATGDDSACFTHAVWLERFDSLGLGGLTRNLAAHCVVESDDGS
RLVLRLAPSQDAMNAEIHVRRVREALAGIGVTRQLIIEAGPLPEAVETPRQRADRIAAER
HAVAVEALERDPHVRQLQETFGARLITSSVKPVDASQRA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgcaagtggcggcctcgcactttccatgaactggtcggg
caggagcatgtccagcgagcgctggtcaatgcactcgatcagggtcgcctgcaccacgcc
taccttttcaccggcacccggggggtcggcaagacaacactggcaagaatacttgccaag
tgcctcaactgtacggcaaagggccatggcgaggagggcgtgacatcgaccccctgtggc
gagtgtgatagctgccgggccatcgacgaggggcgcttcgtcgacctgatcgaggtcgat
gccgcctcgcgtaccaaggtggaggacacccgcgaactgctcgacaacgtgcagtatgcg
ccgacccaggggcgctacaaggtgtatctcatcgatgaggtacacatgctctccaccagc
agcttcaatgccctgctcaagaccctcgaagagccgccgccccacgtcaagttcctgctt
gccaccaccgaccctcagaagttgccgccgacggtgttgtcgcgctgccttcagttcacg
ctcaagaacatgccgcccgagcgcatcgtcgaacacctggccaaggtgctcgaggcggaa
caggttggcttcgaggagagtgcgctgtggctgctgggcaaggcggccgatggctccatg
cgcgatgccatgagcctgaccgaccaggccatcgcctttggccagggacagatttgccac
gccgatgtggccgccatgctgggtaccctggaccaccgtcatgtggtggcgctggtcgag
gcgctggctgaggtcgatgcggcccgtgtgctcaatgaggtgtcccaactggcggaacag
gggccggacttcgcagcggtgctcgacgatgtcaccggtgtcctgcaccgcctggcggtg
gcccagatggtgcccggcgcgctggacaatggccatggcgaccgggatctgctgctggca
ctggccgcacgcttcacccccgaggacatccagctctactaccagatcggtatccagggt
cgcggcgacatggcgcatgccccagacctgcgcaccgccctggagatgaccttgctgcgc
atgctggcctttcgtccccagggcgtgcctcagccggcgaaaacgccgctgccgctgcgg
ggggagcccggccccgtcactccatcggctgccggagccgggccttcgggcagccctccg
cctgacgaggcgcccgccgcggcagggagggagggcgcaggcctccccgatgctgcaaga
ggcgaggacggcctgccggatgccggggaccatgcgaatctcgcgccgactcccgagccg
ccgatggcgcaggatcggttcgaagcgccgccgccctgggaggaagcgttaccggaggcc
tccacggcacctcccaccgtggctgacggtctgaaccagggccgggaggcggcgccgaga
ccggcggagaatgagaaggaaagggaaagggaaaaggaaagcgagaaggagggcgaggtg
gccatcgccgccgctccggctccgctttcgactgccgaggcgtctgtcgttgccggtcca
gagtcggccgtttccaggcccgctgtgattcccgagccggctggcgtcgaggacctggat
tcgccgtcggcgtcgccgtcttctgccccggccgaaatgctgaaggcggggcatgcaacc
ggcgacgattcggcatgtttcacccatgcggtctggcttgagcgtttcgattccctgggc
ctgggcggcctgacacgcaacctggcggcacattgtgtggtcgaatccgacgatggcagc
cgtttggtacttcggctggccccctcccaggacgccatgaatgccgagattcatgttcgg
cgtgtgcgggaagccctggctggtatcggtgtgacgcgacagttgatcatcgaggcgggg
cccttgccggaggcggtcgagacgcctcgacagcgtgccgatcgcattgccgccgagcgg
catgccgtggcggtggaggcgctcgagcgggatccgcacgtgcgccagttgcaggagacg
ttcggtgcacgcctcatcacttccagcgtcaagccggtagatgcatcgcagcgggcctga
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