Halomonas chromatireducens: LOKO_02716
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Entry
LOKO_02716 CDS
T04292
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hco03016
]
LOKO_02716 (rnb)
Enzymes [BR:
hco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LOKO_02716 (rnb)
Transfer RNA biogenesis [BR:
hco03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LOKO_02716 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AMD01769
UniProt:
A0A0X8HFQ4
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All DBs
Position
2892724..2894697
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AA seq
657 aa
AA seq
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MALLPRHTFVTMLQNNPLLAQLKQQIRKTTPRAEGVIKATDKGFGFLETDDGQSYFVPPP
AMKQVLHGDRVQATIHENGDKTSVEPDALLEPGLTRFIARVQKREGRLAVVPDHPSIKNV
LKSRIKNSLDEESIGDGDWVVSRLVRHPLKENDRGFFAQIDELGAKTDDPAVPWRVTLAR
HALEQECPDAGTEWPLLDEGLDRQDLTAEPFFTIDGEKTRDMDDALRIESREDGGWRLTV
AIADPTAYVQEGHAADLEARTRAFTVYLPGQNVTMLPEQLADDLCSLWEGQDRPVLACSL
EVEADGSLGDYRFFAATARSHAKLAYDRVSDWIEGQGDWAPADEIAPQLKALRDMTEARS
AWRAEHALVFKDRPDYVFELDRAGNVLNVRTEQRRIANRMIEESMIAANACCADLLAEKV
GHGIFNVHRAFEPEKAEAAHEFLTAQEIEVELEALSELPRYKELKRALESRDDAWLDARL
RRFQGFTSMSARPGPHFGLGLAAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPAEATLAL
TEQLTERRRLNRMAERDVKDWLYVRYLTSAAKAQEAFEAEIIAINRGGMRVRLTANGATA
FVPAPMIHSDRDKVVIDDKEGRIQVEGEERYKLGDVTRVELVEAREETRSLVARPAT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtggctctcctaccccgccacacgttcgtgaccatgctgcagaacaatccgctgctcgct
cagctcaagcaacagattcgcaagaccacgccccgtgccgagggcgtgatcaaagccacc
gacaagggcttcggttttctagaaaccgatgatggccagtcctatttcgtgccgccgcct
gccatgaagcaggtgctgcatggcgaccgcgtccaggccaccatccacgaaaatggcgac
aagacctcggtcgagcccgacgctctgctggaacccgggctgacacgtttcattgcccgg
gtgcagaagcgcgaaggtcgccttgcggtggtccccgaccacccctcgatcaagaacgtg
ctcaagtcgcggatcaagaacagcctcgacgaagagagcatcggcgacggcgactgggtc
gtgtcgcggctggtgcggcacccgctcaaggagaacgatcgcggcttcttcgcccagatc
gacgagctgggggccaagaccgacgacccggccgtgccgtggcgcgtcaccctggccaga
cacgctctggagcaggagtgccccgacgccggcaccgaatggccgctactggacgagggc
ctggatcgccaggacctcaccgccgagccgttcttcaccatcgatggcgagaagacccgc
gacatggacgatgccctgcgcatcgagtcccgcgaggatggcggctggcgactgacggtg
gccatcgccgaccccaccgcctacgttcaggaggggcatgccgccgacctggaggctcgc
acgcgcgccttcaccgtctacctgccgggccagaacgtcaccatgctgcccgagcagctg
gccgatgacctctgctcgctgtgggaaggccaggatcgtccggtgctggcctgctccctg
gaagtggaagccgacggcagcctcggcgactaccgcttctttgccgccaccgcgcgctcc
cacgccaagctggcctatgaccgagtctccgactggatcgagggccagggcgactgggca
ccggcggatgagatcgcccctcagctcaaggcgctgcgtgacatgaccgaggcgcgcagc
gcctggcgcgccgagcacgccctggtattcaaggatcgtccggactatgtcttcgaactg
gatcgggccggcaacgtgctcaacgtccgcaccgagcagcgacgcatcgccaaccgcatg
atcgaggagtcgatgatcgcggcgaacgcctgctgtgccgacctgctcgcggagaaggtg
ggccacggcatcttcaatgtccaccgtgccttcgagccggagaaggccgaagccgcccac
gagttcctcaccgcccaggagatcgaggtcgaactcgaggccctctccgagctaccccgc
tacaaggagctcaagcgtgccttggagagccgcgacgacgcctggctggatgcccgcctg
cgccgttttcagggcttcaccagcatgtcagctcgcccagggccgcatttcgggctgggc
ctggccgcctacgccacctggacctcgccgattcgcaagtatggcgacatggtcaaccac
cgcctgatcaagcgagtgctcaagggtgagcaggcgccggcggaagccaccctggcactg
acagaacagctgaccgagcgtcgccgcctgaatcgcatggccgagcgcgacgtcaaggac
tggctctatgtgcgctacctgacatcggctgccaaggcccaggaagccttcgaggcggag
atcatcgcgatcaaccgcggcggcatgcgcgtccggctgaccgccaacggtgcgaccgcg
ttcgttcctgcgccgatgatccacagcgaccgcgacaaggtggtcatcgacgacaaggaa
ggccgtatccaggtggaaggcgaagagcgctacaagctcggtgacgtcacccgcgtggaa
ctggtcgaggcccgcgaggagacccgctcgctggtggcacgacctgctacctag
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