Halomonas chromatireducens: LOKO_02873
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Entry
LOKO_02873 CDS
T04292
Symbol
csiR_3
Name
(GenBank) HTH-type transcriptional repressor CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hco03000
]
LOKO_02873 (csiR_3)
Transcription factors [BR:
hco03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LOKO_02873 (csiR_3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
WHD_DnaB
Motif
Other DBs
NCBI-ProteinID:
AMD01924
UniProt:
A0A109UML1
LinkDB
All DBs
Position
complement(3065347..3066018)
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AA seq
223 aa
AA seq
DB search
MVISREKGRTTTSGRIYDTLRQDLVNGRFAAGEKVSISALKEHYGVGLSPLREALNRLAA
YGLLEQESQRGFRVPRLDRRELDDIAEMRRELEGMALERAIRFGDAEWESELLAAAHRLK
RADMVPEAVDEWERLHNRFHRTLVAPCGSVWLLRFIEQLHDQFDRYRRMAPEEPQVRRVL
DAQHGELVTLALERDIKAARELMDDHVQRSYEVALKGAMTGAD
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggttatatccagggaaaaggggcgtacgacgacctccgggcgcatctacgacaccctg
cgtcaggacctcgtcaacggacgcttcgcggcgggcgagaaagtgtccatcagcgccctc
aaggagcactacggcgtagggctcagcccgctacgcgaagcgcttaaccggctcgccgcc
tatggcttgctggagcaggagagccagcgtggctttcgggtgcctcggctggatcgcagg
gagctggatgacatagcagagatgcgtcgcgaactggagggcatggccctggagcgggcg
atccgcttcggtgacgcggagtgggagtcggagctgctggcggcagcgcacaggctcaag
cgggccgacatggtgccggaggcggtcgacgaatgggagcgattgcacaaccgcttccac
cgtaccctggtggccccgtgcggctcggtctggttgctgcgcttcatcgagcaactccac
gaccagttcgaccgctatcgtcgcatggcgccggaagagccccaggtgcgacgggtactc
gatgcccagcacggtgagctggtcacgctggccctggagcgcgacatcaaggccgcgaga
gagctgatggacgaccatgtccagcgttcgtatgaagtggctctgaaaggggcgatgacg
ggggctgattag
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