Halomonas chromatireducens: LOKO_02998
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Entry
LOKO_02998 CDS
T04292
Symbol
trpS
Name
(GenBank) Tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOKO_02998 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hco01007
]
LOKO_02998 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hco03016
]
LOKO_02998 (trpS)
Enzymes [BR:
hco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LOKO_02998 (trpS)
Amino acid related enzymes [BR:
hco01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LOKO_02998 (trpS)
Transfer RNA biogenesis [BR:
hco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LOKO_02998 (trpS)
Prokaryotic type
LOKO_02998 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AMD02046
UniProt:
A0A120JWJ8
LinkDB
All DBs
Position
complement(3197941..3198966)
Genome browser
AA seq
341 aa
AA seq
DB search
MSAASQKTRVLTGITTTGTPHLGNYVGAIKPAIAASQDPTVQSYYFLADLHALIKCQDPQ
RVQESRLEIAATWLALGLDTDNAIFYRQSDVPEIPELTWMLSCVCAKGLMNRAHAYKAAV
AENEAAGNQDPDKGITMGLFGYPVLMAADILMFNAHKVPVGRDQIQHIEMARDIAGRFNH
LYKGDFFTQPEAVVDDNVATLNGLDGRKMSKSYNNTIPLFVAEKKLLKLVRKIKTNSLEP
GEPKDPDTCTLFQIYSAFASVEETAAMRAEYQAGIGWGEAKNRLFEMLNEQLREPRERYL
ALMEDPGHIEQVLLKGAERARVEAAPFMDRLRHAAGLGRFV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcatcccagaagacacgcgttctcaccggcatcaccaccaccggtaccccc
cacctgggcaactatgtcggggcgatcaagcccgccatcgccgcgagccaggatcccacc
gtccagtcctactacttcctcgccgacctgcatgcgctgatcaagtgccaggatccccag
cgggtgcaggagtcgcgcctggaaattgccgccacctggctggcgctgggcctggatacc
gacaacgccatcttctatcgtcagtccgacgtgcccgagattcccgaactgacctggatg
ctctcctgcgtctgcgccaaggggctgatgaaccgtgcccatgcctacaaggcggcggtg
gccgaaaacgaggcggccggcaaccaggatccggacaagggcatcaccatggggctgttc
ggctatccggtcctgatggccgcagacatcctgatgttcaacgcccacaaggtgccggtg
ggccgcgatcagatccagcacatcgagatggcccgcgatatcgccgggcgtttcaaccat
ctctacaagggcgacttcttcacccagcccgaggcagtggtggacgacaacgtcgccacg
ctgaacggacttgacggacgcaagatgtccaagagctacaacaacaccattccgctcttc
gtcgccgagaagaagctgctcaagctggtgcgcaagatcaagaccaattcgctggagccg
ggtgagcccaaggatccggacacctgcaccctgttccagatctactcggccttcgccagt
gtcgaagagacggcggccatgcgcgcggagtaccaggctggtatcggctggggcgaggcc
aagaaccggctgttcgagatgctcaacgagcagttgcgtgagccccgggagcgttatctg
gcgctgatggaggatccggggcatatcgagcaggtgctgctcaagggtgcagagcgggcg
cgcgtcgaggccgcgccgttcatggatcgtctgcgtcatgccgcggggcttggccgcttc
gtctga
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