Halomonas chromatireducens: LOKO_03023
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Entry
LOKO_03023 CDS
T04292
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOKO_03023 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hco01007
]
LOKO_03023 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hco03016
]
LOKO_03023 (lysS)
Enzymes [BR:
hco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LOKO_03023 (lysS)
Amino acid related enzymes [BR:
hco01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LOKO_03023 (lysS)
Transfer RNA biogenesis [BR:
hco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LOKO_03023 (lysS)
Prokaryotic type
Other AARSs
LOKO_03023 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AMD02071
UniProt:
A0A0X8HG88
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All DBs
Position
complement(3219785..3221335)
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AA seq
516 aa
AA seq
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MADPQSPSESPLQDENRLIAERRAKLADRRKLADARGESAFPNDFRRDSQAAELIAELGD
KEKEALETLGREAAVAGRIMRKRGPFLVIQDATGQIQLYIDKKGLSEETLEDIKGWDIGD
IVAGRGPVHKSGKGDLYVMMAEARLLTKSLRPLPDKFHGLTDMEARYRQRYVDLIMNPDS
RKVFETRAGVISAMRRFFEERGFMEVETPMLQPIPGGATARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGLSTRHNPEFTMIEFYQAHANHNDLMDLTEEMLRS
VARQVLGTTTVINTVRNSEGEVLETFEYDFGSPLKRITVFDAILEYNPDIHAEALADASA
ARQIAERLDIDVKDGWGLGKVQIEIFEKTVEHRLKQPTFITEYPTEVSPLARRKDSNPFV
TERFEFFVGGREIANGFSELNDAEDQAERFREQVAEKEAGDIEAMYYDADYVRALEYGMP
PTAGEGIGIDRLVMLFTDSASIRDVLLFPAMRPEVD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccccagagcccttccgaatcccccctgcaggacgagaaccgcctgatcgcc
gagcgtcgtgccaagctggccgatcgccgcaagctggccgatgcgcggggcgagagcgcc
ttccccaacgactttcgccgtgacagccaggccgccgagctgatcgccgagctcggtgac
aaggagaaggaggcgctggagaccctggggcgcgaggccgccgtggccgggcgcatcatg
cgcaagcggggccccttcctggtcatccaggatgccactgggcagatccagctctatatc
gacaagaaggggctgtcggaagagacgctggaggacatcaagggctgggacatcggcgat
atcgtggccggccgtggtccggtacacaagtccggcaagggcgacctctacgtgatgatg
gccgaagccaggctgctgaccaagagcctgcgtccgctgcccgacaagttccatggcctg
accgacatggaagcgcgctaccgtcagcgctacgtcgatctgatcatgaaccccgactcg
cgcaaggtgttcgagacccgggccggggtgatcagcgccatgcgtcgcttcttcgaggag
cgcggcttcatggaggtggaaacccccatgctgcagccgattcccggtggcgccaccgcg
cgccctttcatcacacaccacaatgcgctggacatcgacatgtacctgcgcatcgcaccg
gaactctacctcaagcgcctggtggtgggcggcttcgaacgggtcttcgagatcaaccgc
aacttccgaaacgaggggctctctacgcggcacaaccccgagttcaccatgatcgagttc
taccaggcccatgcgaaccacaacgacctgatggacctcaccgaggagatgctgcgcagc
gtcgcccggcaggtgctgggcaccaccaccgtgatcaacaccgtacgcaacagcgagggc
gaggtgctcgagaccttcgagtacgacttcggcagcccgctgaagcgtatcaccgtgttc
gacgccatcctcgaatacaatccggacatccacgccgaggcgctggccgatgcgtccgcc
gcgcgccagatcgccgagcgcctggatattgacgtcaaggatggctgggggctgggcaag
gttcagatcgagatcttcgagaagaccgtcgagcaccgcctgaagcagccgaccttcatt
accgaataccccaccgaggtgagcccgctggcgcggcgcaaggacagcaaccccttcgtc
accgagcgtttcgagttcttcgtcggtggacgcgagattgccaacggcttctcggagctc
aacgacgccgaggaccaggccgagcgcttccgtgagcaggtggccgagaaggaggccggc
gacatcgaggcgatgtactacgacgccgactacgtccgcgcgctggagtacggcatgccg
cccaccgcgggcgagggcatcggcatcgaccggctcgtcatgctgttcaccgacagcgcc
tcgatccgggatgtactgctgttcccggccatgcgccctgaggtggattga
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