Halomonas chromatireducens: LOKO_03081
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Entry
LOKO_03081 CDS
T04292
Symbol
fadB_4
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00071
Fatty acid degradation
hco00280
Valine, leucine and isoleucine degradation
hco00310
Lysine degradation
hco00362
Benzoate degradation
hco00380
Tryptophan metabolism
hco00410
beta-Alanine metabolism
hco00640
Propanoate metabolism
hco00650
Butanoate metabolism
hco00907
Pinene, camphor and geraniol degradation
hco00930
Caprolactam degradation
hco01100
Metabolic pathways
hco01110
Biosynthesis of secondary metabolites
hco01120
Microbial metabolism in diverse environments
hco01200
Carbon metabolism
hco01212
Fatty acid metabolism
Module
hco_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LOKO_03081 (fadB_4)
00650 Butanoate metabolism
LOKO_03081 (fadB_4)
09103 Lipid metabolism
00071 Fatty acid degradation
LOKO_03081 (fadB_4)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LOKO_03081 (fadB_4)
00310 Lysine degradation
LOKO_03081 (fadB_4)
00380 Tryptophan metabolism
LOKO_03081 (fadB_4)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LOKO_03081 (fadB_4)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LOKO_03081 (fadB_4)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LOKO_03081 (fadB_4)
00930 Caprolactam degradation
LOKO_03081 (fadB_4)
Enzymes [BR:
hco01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LOKO_03081 (fadB_4)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LOKO_03081 (fadB_4)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LOKO_03081 (fadB_4)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LOKO_03081 (fadB_4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMD02128
UniProt:
A0A0X8HGC3
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All DBs
Position
3286381..3288570
Genome browser
AA seq
729 aa
AA seq
DB search
MIYQGNAISVARGTKTGGDDIAMLTFDLKGESINKLSSAVVTELGDAVKAIQSESGLKGL
VIGSAKDVFIVGADITEFHGLFDKGEEYLVEMNLKVHDIFNAIEDLPFPTVTAINGLALG
GGCEVTLTTDFRVMGEKAKIGLPETKLGILPGWGGCVRLPRMIGADNAIEWIAGGTENRA
DAALKMGAVDAVVPNESLEDAALDILARAYSGELDYQARRDEKTGPLKLNPIEQMMAFET
AKGYVKGKAGPHYPAPVEAIKVIQKGAGEERGRAQAIEAKAFAKLALSDIAFNLVGLFLN
DQVVKKKASKYEKQARPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKEEAVELGLKE
SRKLFAKQVERKKLTTEQMAEKLTLIRPTLSYGDFGHVDLVVEAVVENPKVKDAVLTEVE
GLVGEETILTSNTSTISITRLAENLKRPENFCGMHFFNPVHRMPLVEVIRGEKTGDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEQGADFQRVDKIMEKFGWPMG
PAYLLDVVGMDTAVHAGEVMAEGFPERMGQMGGDGSKSAIQVMYENERLGQKNDKGFYAY
EEDKKGKPKKVSDDKAYELVKQVVKSEQEFSDEDIIARMMVPLCLETVRCLEDGIVETPA
EADMALIYGIGSPPFRGGALRYIDAMGIGEFVKLADGLADELGPLYAPTDKLRKMAEAGE
RFYTTQAQS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggcaatgccatctcggtggcacgcggtaccaagaccgggggcgacgac
atcgccatgctcaccttcgacctgaagggtgagtccatcaacaagctgtccagcgcggtc
gtgaccgagctgggcgatgccgtcaaggcgatccagagcgagagcggcctcaaggggctg
gttatcggcagcgccaaggatgtcttcatcgtgggtgccgatatcaccgaattccatggc
ctgttcgataagggcgaggagtatctggtcgagatgaacctcaaggttcacgacatcttc
aacgccatcgaggacctgccgttccccacggttaccgccatcaacggcctggcgctgggc
ggcggctgtgaagtcacgctgaccaccgatttccgtgtcatgggcgagaaggccaagatc
ggcctgcccgagaccaagctgggcatcctgccgggctggggtggctgcgtgcgcctgcct
cggatgatcggggccgacaacgccatcgaatggatcgccggtggtaccgagaaccgtgcc
gatgccgcgctcaagatgggtgccgtcgatgcggtggttccgaatgaatccctcgaagac
gccgcgctggatattctggcgcgtgcctacagcggcgaattggactaccaggcgcgccgg
gacgagaagacagggccgctcaagctcaatcccatcgaacagatgatggccttcgagacc
gccaagggctacgtcaagggcaaggcggggccgcactacccggcaccggtagaagcgatc
aaggtgatccagaagggcgccggcgaagagcgcgggcgggcccaggccatcgaggccaag
gccttcgccaagctggcgctgagcgatattgccttcaacctcgtggggctgttcctcaac
gatcaggtggtcaagaagaaggccagcaagtacgagaaacaggcccggccggtcaagcag
accgccgtgttgggtgcgggcatcatgggcggcggcatcgcctaccagagcgcctccaag
ggcacgccgatcctgatgaaggacatcaaggaagaggctgtcgaactaggtctcaaggag
tcgcgcaagctgttcgccaagcaggtggaacggaagaagctgaccaccgagcagatggcc
gagaagctgaccctgatccggccgaccctctcctacggcgactttggccacgttgacctg
gtagtcgaagccgtagtcgagaaccccaaggtcaaggacgcggtgctgaccgaagtggaa
ggcctggtcggcgaggagaccatcctcacctccaatacctccaccatttccatcacccgc
ctggccgaaaacctcaagcggcccgagaacttctgcggcatgcacttcttcaatccggtg
caccgcatgccgctggtcgaggtcatccgtggcgagaagaccggtgacgccgccgtggcg
gccaccgtggcctatgcccgcgccatgggcaagacccccatcgtggtcaacgattgcccc
gggttcctggtcaaccgggtgctgttcccctatttcggcggcttcagtctgctggtggag
cagggcgccgatttccagcgcgtcgacaagatcatggagaagttcggctggcccatgggt
cccgcctacctgctcgacgtggttggcatggataccgctgttcatgctggtgaagtgatg
gccgagggtttccccgaacgcatgggccagatgggcggtgacggaagcaagagcgccatc
caggtgatgtatgagaatgagcgcctgggccagaagaacgacaagggcttctacgcctac
gaggaagacaagaagggcaagccgaagaaagtcagcgacgacaaggcctatgagctggtc
aagcaggtggtcaagtcggagcaggagttctccgacgaggacatcattgcccgcatgatg
gtgccgctgtgcctggagaccgtgcgctgcctggaggatggcatcgtcgagacaccggcc
gaagcggacatggcgttgatctacggcatcggctccccgccgttccgcggcggtgcgctg
cgctacatcgacgccatgggaatcggtgagttcgtcaagctggccgatggcctggccgac
gagctggggccgctctacgcgcccaccgacaagctgcgcaagatggccgaagccggcgaa
cgcttctataccacccaggcccagagctga
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