Halomonas chromatireducens: LOKO_03278
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Entry
LOKO_03278 CDS
T04292
Symbol
xerD_2
Name
(GenBank) Tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hco03036
]
LOKO_03278 (xerD_2)
Chromosome and associated proteins [BR:
hco03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LOKO_03278 (xerD_2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DUF3435
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
AMD02324
UniProt:
A0A0X8HGS2
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All DBs
Position
complement(3495555..3496457)
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AA seq
300 aa
AA seq
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MSHADESHVLIDTFLDALWLERGASDHTLTAYRHDLAAWVERLGETGGSLLAPGDAALPA
WLDERRAAGYRLRSNARLLSSLRSFYRWALSESRTDRDPLADVRLPRVRPNLPDTLEEAE
VERLLAAPDLSTDLGLRDRAMLEVLYGCGLRVSELVGLTVDAVNLRQGVLRVRGKGDKDR
LVPLGEEAVHWVSRYLRTARGALIADITRPALFPGRGDNCMTRQAFWHRIKAHARTAGIT
RPLSPHTLRHAFATHLLNHGANLRVVQLLLGHSDLSTTQIYTHVAQARLEALHADHHPRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgccgatgaatctcacgtactgatcgacacctttctcgatgcgctgtggctt
gagcggggggcgagcgatcacacgctgacggcataccgtcatgaccttgcggcctgggtc
gagcgcctgggggaaacgggtggctccctgcttgcccccggcgatgcggcgctaccggcc
tggctcgacgagcggcgagcagcgggttatcgtctgcgcagcaatgcccggctgctttcc
agcctgcgtagcttctatcgctgggcgctgtccgagtcgcgcaccgaccgcgatccgctg
gcggacgtgcgcctgccgcgggtgcggccgaacctgccggatacccttgaagaggcggag
gtggagcgcctgctggccgcccccgatctctcgacggacctgggcctgcgtgaccgggcc
atgctcgaagtactctacggctgcgggctgcgcgtctcggagctggtggggttgaccgtg
gatgcagtcaaccttcgccagggcgtactgcgtgtgcgcgggaaaggggacaaggaccgg
ctggtccccctgggggaagaagccgtacactgggtgtcacgctatctacgcacggcccgc
ggggcgctgattgccgatatcactcgtccagcactttttcccggtcgaggtgataactgc
atgacgcggcaggcattctggcatcgcatcaaggcccatgcccgcaccgccgggatcacg
cgaccactgtcgccccacaccctgcggcacgccttcgcgacgcatctattgaatcatggg
gccaatctgcgtgtcgtacagctgctgctcggtcacagcgacctgtcgaccactcagatc
tatacccatgtcgcgcaggcacgactcgaagccctgcacgccgaccatcatcctcgaggc
tga
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