Halomonas chromatireducens: LOKO_03416
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Entry
LOKO_03416 CDS
T04292
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hco03016
]
LOKO_03416 (truB)
Enzymes [BR:
hco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LOKO_03416 (truB)
Transfer RNA biogenesis [BR:
hco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOKO_03416 (truB)
Prokaryotic type
LOKO_03416 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
AMD02459
UniProt:
A0A0X8HH14
LinkDB
All DBs
Position
complement(3637087..3638013)
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AA seq
308 aa
AA seq
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MARRRRGLPVNGVLLLDKPQGASSNHALQRARRLFQAQKAGHTGTLDPMATGLLPVCFGE
ATKFSSYLLEADKVYRTRIQLGVVTDTGDAEGEVVERQAVPVLKEADIEAVLTRFRGEIE
QVPPMYSALKHQGRKLYELAREGKTVERAARRVTVYDARLLAHDGDAFTLEVRCSKGTYI
RTLAEDIGRALGCGAHITALRRLKTGPFDASEMVAFEGLDAQPGQAELEARLLPVDVLVA
HLPSLELDAEAVSRLRHGQSAFVSPGAMAPGETTRLYHDGIFLGLGVVRVAGEIAPRRLL
STAPADSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcggcgtcgcggtctgccggtgaacggggtgctgctgctcgacaagccccag
ggagcgtcgagtaaccatgccctgcagcgtgcccggcgcctgttccaggcgcagaaggca
ggtcacaccgggacgctcgaccccatggccaccggattgcttccggtctgctttggcgag
gcgaccaagttctcctcgtacctgctggaggccgacaaggtctaccgcactcgcatccaa
ctgggtgttgtgaccgacaccggcgatgccgaaggcgaggtggtcgagcgccaggcggta
ccggtgctgaaggaggcggacattgaagcggtcctgacgcggttccgcggcgagatcgag
caggttccgcccatgtactcggcgctcaagcatcaggggcgcaagctctacgagctggcc
cgcgagggcaagacggtagagcgtgcagcccgccgcgtgacagtgtatgatgcgcgcctt
ctggcccatgatggcgatgccttcacgctggaagtgcgctgcagcaagggcacctatatc
cgcaccctggccgaagacatcgggcgggctctggggtgtggcgctcatatcactgcgctg
cggcggctcaagaccgggcccttcgacgccagcgagatggttgccttcgaggggcttgat
gcgcagccaggccaggccgagctcgaggcaagactcttgccggtggatgttcttgttgcg
catctgccgtcgctcgagctggatgccgaggcagtgtcacggctgcggcatgggcagtcg
gcctttgtttcgcccggcgccatggcgccaggcgagacgacaagactctatcacgacggg
atcttcttgggtctcggcgtggtcagggtggcaggggagattgccccccgccgcctgctg
agtaccgctccggcggactcggtgtga
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