Halomonas chromatireducens: LOKO_03472
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Entry
LOKO_03472 CDS
T04292
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hco
Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hco03016
]
LOKO_03472 (truD)
Enzymes [BR:
hco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LOKO_03472 (truD)
Transfer RNA biogenesis [BR:
hco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOKO_03472 (truD)
Prokaryotic type
LOKO_03472 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AMD02512
UniProt:
A0A120JWT8
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All DBs
Position
complement(3694040..3695110)
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AA seq
356 aa
AA seq
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MTPTGTADPWPRVLDAEFGPPPAGDYRATPEDFVVEEILDFAPEGQGEHLWLWVEKRGLT
TLEVVRHLARACEVTQRAVGYSGMKDRIAVTRQWLSVHLPGREGPGDLAERLASHGVQVL
EQVRHPRKLKRGVHRGNRFSLVITGEAVQAPGLEARWEWLCRHGVPNGFGPQRFGPDGRN
LVRAQSVLARGWRKRDDREGMMLSTARSYLFNELLAMRQGDGNWDRLLPGEVAMLDGTAS
QFVVDTVDAELAERAARLDLHPSGVLWGVGSSATAGSAAGYEQRLRERHGPLCDGLERAG
VKLARRPLRMRLGEPRLGREPACLRFDFILPRGSFATAVLRELIEHPTLGATPALT
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgaccgggacggccgatccctggccgcgggtgctggatgccgaatttggcccg
ccgccggccggcgactatcgcgccaccccggaggatttcgtggtcgaggaaatcctcgac
ttcgccccggagggacagggtgagcacctctggctctgggtagagaagcgggggcttacc
accctggaggtggtgcgccatctggctcgcgcctgcgaggtgacgcagcgcgccgtgggc
tattccggcatgaaggatcgcatcgccgtgacccggcagtggctgtcggtgcatctgccg
ggccgcgagggccccggtgacctggccgagcgcctggcgagccacggcgtgcaggtgctg
gagcaggtgcgccatccccgcaagctcaagcgtggcgttcaccgcggaaaccgcttctcg
ctggttatcaccggggaggcggtgcaggcgcccgggctggaggcgcgctgggagtggctg
tgccgccatggcgtgcccaacggctttggcccgcagcgtttcggccccgacggccgtaac
ctggtacgggcgcagtcagtactggcccgcggctggcgcaagcgggacgatcgggagggc
atgatgctctccactgcgcgcagctatctgttcaacgagctgctggccatgcgccagggg
gatggcaactgggaccggttgctgccgggggaggtggcgatgctcgatggtactgccagc
cagttcgttgtcgacaccgtcgatgctgagctggccgagcgagccgcccgactcgacctg
cacccaagcggggtgctctggggcgtcggctcgtcggccacggcgggcagcgcggcgggg
tacgagcagcgcctgcgcgagcgccatgggccgctctgcgatggtctggagagagccggg
gtgaagctggcccgacggcccctgcgcatgcgcctgggagagccccgcctgggtcgcgaa
ccggcgtgcctgcggttcgatttcatcctgccccgtggcagttttgccacggcggtgctg
cgcgagctgatcgagcacccgacattgggtgcgacaccggcgttgacctga
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