Halomonas chromatireducens: LOKO_03497
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Entry
LOKO_03497 CDS
T04292
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00300
Lysine biosynthesis
hco00470
D-Amino acid metabolism
hco01100
Metabolic pathways
hco01110
Biosynthesis of secondary metabolites
hco01120
Microbial metabolism in diverse environments
hco01230
Biosynthesis of amino acids
Module
hco_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOKO_03497 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOKO_03497 (dapF)
Enzymes [BR:
hco01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LOKO_03497 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AMD02537
UniProt:
A0A125R0R1
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All DBs
Position
3719917..3720750
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFMVIDLVTQRARLRDEQVRQLADRRFGIGFDQLLIVEPPRDPDMDF
RYRIFNADGSEVENCGNGARCFARFVRDQRLTHKHEIHVETAGGPLTLLVEDDGQVTVDM
GVPRFAPQALPFEANEDLLRHELEVDGERVEVGAVSMGNPHVVLRVDDVERAPVERLGPA
IEHHPRFPRRVNVGFMEVVSPHEIRLRVHERGSGETLACGTGACAAVACGIRQGLLESPV
TVHLRGGDLRIEWPAEEASLRMTGPAERVFDGRVALA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccacttcaccaagatgcatggcctcggcaacgacttcatggtcatcgacctg
gtcacccagcgcgcccggctgcgggacgagcaggttcgacagttggccgatcgccgtttc
ggcatcggcttcgaccagctgctgatcgtcgagccgccgcgggacccggacatggacttc
cgctaccgcatcttcaatgccgacggcagtgaagtggagaactgtggcaacggagcgcgc
tgcttcgcgcggttcgtgcgcgatcagcgcctgacccacaagcacgagatccatgtggag
accgccggcggccccctgaccctgctggtcgaggacgacggccaggtgacggtggacatg
ggcgtcccgcgcttcgccccccaggcgctgcccttcgaggccaacgaggacctgctgcgc
catgagctggaggtggacggtgaacgcgtcgaggtgggtgcggtctccatgggcaacccc
catgtggtactgcgggtcgacgacgtcgagcgggcgcccgtcgagcgcctcgggcccgcc
atcgaacatcacccgcgctttccacgccgggtcaatgtaggcttcatggaggtcgtgtcg
ccccacgagatccgcctcagggttcatgagcgcggcagcggggagacgctggcctgtggc
accggcgcctgcgcggcggtggcctgcggcatccgccaggggctgctggaaagcccggtc
accgtgcatctcagaggtggcgacctgcgcatcgagtggccggccgaggaggcctcgctg
cgcatgaccggccccgccgagcgcgtcttcgacggtcgcgtcgccctggcttga
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