Halomonas chromatireducens: LOKO_03639
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Entry
LOKO_03639 CDS
T04292
Symbol
fadD_3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00061
Fatty acid biosynthesis
hco00071
Fatty acid degradation
hco01100
Metabolic pathways
hco01212
Fatty acid metabolism
hco02024
Quorum sensing
hco04146
Peroxisome
Module
hco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LOKO_03639 (fadD_3)
00071 Fatty acid degradation
LOKO_03639 (fadD_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOKO_03639 (fadD_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOKO_03639 (fadD_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hco01004
]
LOKO_03639 (fadD_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hco04147
]
LOKO_03639 (fadD_3)
Enzymes [BR:
hco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LOKO_03639 (fadD_3)
Lipid biosynthesis proteins [BR:
hco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LOKO_03639 (fadD_3)
Exosome [BR:
hco04147
]
Exosomal proteins
Exosomal proteins of breast milk
LOKO_03639 (fadD_3)
Exosomal proteins of breast cancer cells
LOKO_03639 (fadD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AMD02679
UniProt:
A0A109UNI1
LinkDB
All DBs
Position
3862412..3864148
Genome browser
AA seq
578 aa
AA seq
DB search
MSNVHYYNNKPWASHYRAARSETGEASASHHLHDNLPALIQAAGNTYSQQLAFTTCMPNG
MNGRLTYGEVEEMSDAFAVYLRECVKLEPGTRVAVQMPNCLTLPVVAFGILKAGCILVNV
NPLYTKREMEHQFNDSGTQALVIVDMFIDKLESILERTEIKQVVVTSIAQWFPPAVKGVL
QLVLKYWNRVLPRHSLDVDTIDQALSRGREAKAAHSINVSQYWQHLDRSDTALLQYTGGT
TGVSKGAELTHGNLISNLEQVDSVAGDHIEPGKECILTALPIYHIFAFTVNLLAFYHKGA
HNVLVPSPRPIQNCQRAFDNYPISWISGVNTLYNALLNEEWFTVYPPPSMKVALAGGTAL
HKAVAERWRAVVGSPIAEGYGLTETSPVICFNPIGQERPDCIGIPAPQTDVRLVDEQGEP
VPVGEPGEIIVRGPQVMKGYWNRPEETASAIKDGWFYTGDIGVMAEDGYFKIVDRKKDMI
LVSGFNVYPNEVEDCIARIPQVQESAVIGVANEQTGEAVHAYVVLREEGITEKDVIAHCK
QELAAYKVPRKVVFWGELPKTPVGKVLRKEVRATVTSD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgttcattattacaataacaagccctgggcaagtcactaccgggccgcccgt
tccgaaacgggtgaagcatctgccagccatcacctgcacgacaacctgcctgcgctcatt
caggcggcgggaaacacctacagccaacagctcgccttcaccacctgcatgcccaatggc
atgaatggtcgcctgacctacggcgaagtcgaagaaatgtcggatgccttcgccgtttat
ttacgcgaatgcgtcaagctggagcccggcacccgcgtggccgtacagatgcccaactgc
ctgacgctacccgttgtagccttcggcatcctcaaggccggctgtattctggtcaacgtc
aatccgctctacaccaagcgggaaatggaacaccagttcaacgacagcgggacgcaggcc
ctggtcattgtcgatatgttcatcgacaagctggaatccatcctcgagcggaccgagatc
aagcaggtggtggtcacttctatagcccagtggtttccccctgccgtaaagggcgtattg
cagctggtgctcaaatactggaaccgggtgcttcccaggcactcattggacgtcgacacc
atcgatcaggcactgagcagaggacgagaagcgaaggccgcccacagcatcaatgtaagc
cagtactggcagcatctggaccgctcggataccgccttgctgcaatataccgggggcacc
accggggtcagcaagggcgccgagcttacccacggcaacctgatcagcaacctggagcag
gtggactccgtcgccggtgatcacatcgaaccgggcaaggagtgcatcctcacggcgttg
ccgatctaccacatctttgccttcaccgttaacctgctggcgttttatcacaaaggggcg
cacaacgttctggtgcccagcccgcgacccatccagaactgccagcgcgctttcgacaac
taccccatctcgtggatctctggcgtcaatacgctttataacgccctgctgaacgaggag
tggttcaccgtctatccccctccctccatgaaggtggcactggccggtggcaccgcgctg
cacaaggctgtcgccgagcgctggcgtgcggtggtcggcagtccaattgccgagggctat
gggctgacggaaacctccccggtcatctgtttcaaccccatcggccaggagcgcccagac
tgcatcggtataccggcaccgcaaaccgatgtgcgccttgtcgatgagcagggcgagccg
gtgccggtcggtgagccgggcgaaatcatcgtgcgtggtcctcaggtcatgaaagggtac
tggaatcgtcccgaggaaaccgccagtgccatcaaggatggctggttctacacgggcgat
atcggtgtcatggctgaagacggctatttcaagattgtcgatcgcaagaaagacatgatt
cttgtcagcggcttcaacgtctaccccaatgaagtcgaggattgtatcgcccgtattcca
caggtgcaggagtcagcggtcattggtgtcgccaatgagcagaccggcgaagccgtccat
gcctatgtggttctgcgcgaggagggcatcaccgagaaggacgtgatcgcgcactgcaag
caggagctggctgcctacaaggtgcccaggaaagtcgtgttctggggcgagctacccaag
acaccggttggcaaggtcttgcgtaaagaagtgcgagccacagtcacgagtgactga
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