KEGG   Helicobacter cinaedi PAGU611: HCN_0162
Entry
HCN_0162          CDS       T02034                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hcp  Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:hcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcp03019]
    HCN_0162 (rnc)
   03009 Ribosome biogenesis [BR:hcp03009]
    HCN_0162 (rnc)
   03036 Chromosome and associated proteins [BR:hcp03036]
    HCN_0162 (rnc)
Enzymes [BR:hcp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HCN_0162 (rnc)
Messenger RNA biogenesis [BR:hcp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HCN_0162 (rnc)
Ribosome biogenesis [BR:hcp03009]
 Eukaryotic type
  90S particles
   RNase
    HCN_0162 (rnc)
 Prokaryotic type
  rRNA processing factors
   HCN_0162 (rnc)
Chromosome and associated proteins [BR:hcp03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HCN_0162 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: BAM11489
UniProt: A0A809NC98
LinkDB
Position
179345..180073
AA seq 242 aa
MPKYNPPKNAQALEKTLGYTFKDKKLLLEALTHKSCKNAYNNERLEFLGDAVLDLLVGEF
LFRKFPSAKEGELSKLRACIVNEKGFMKLAKSLDLGAFLHISQSEEHNKGREKASILSNA
FEALMGAIYLESELAFLKDIVLKLLEQNYAKIDLRSLFTDYKTALQELTQAIFGEIPTYT
LVSESGPDHQKSFEIALSVNGVEYARAKGSSKKDAQQKSAQIAYEKISALYKNNHQNNDK
ER
NT seq 729 nt   +upstreamnt  +downstreamnt
atgccaaagtataatcccccaaaaaacgctcaagcccttgaaaaaacacttggttacact
tttaaagataaaaagctcctgcttgaagcccttacgcataaaagctgtaagaatgcctat
aataatgaacggctagagtttttgggtgatgcggtgcttgacttgcttgtgggggagttt
ttatttagaaaatttcctagtgctaaggagggtgagttaagcaagttgcgagcgtgtatt
gtcaatgaaaagggctttatgaaacttgcaaaatcgcttgatttgggagcatttttgcat
atctcacagagtgaagagcataataaagggcgagaaaaagcctctatcctttcaaatgcc
tttgaagccttgatgggtgcgatttatttagaatctgaactggcatttcttaaagatatt
gtgttaaaactcttagagcaaaattatgccaagattgatttacgctcactttttacagat
tataagactgctttgcaagagcttacacaagcgatttttggggagattccaacttacacg
cttgtgagtgaaagcggacctgatcatcaaaaaagctttgaaattgccctaagtgtcaat
ggggtggaatacgcaagggcaaaaggtagctcaaaaaaagatgcccagcaaaaatccgct
caaattgcttatgaaaaaatctctgccctatacaaaaataatcatcaaaacaatgataag
gagagatga

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