Helicobacter cinaedi PAGU611: HCN_0170
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Entry
HCN_0170 CDS
T02034
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
hcp
Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcp03021
]
HCN_0170 (nusA)
03009 Ribosome biogenesis [BR:
hcp03009
]
HCN_0170 (nusA)
Transcription machinery [BR:
hcp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HCN_0170 (nusA)
Ribosome biogenesis [BR:
hcp03009
]
Prokaryotic type
rRNA transcription factors
HCN_0170 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
KH_NusA_C
NusA_N
KH_2
KH_1
DNA_pol3_a_NII
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BAM11496
LinkDB
All DBs
Position
complement(189479..190687)
Genome browser
AA seq
402 aa
AA seq
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MEKILDIIDLIAYDKGLDNGVVLEIVKNGLIKIAQEEINPLYHYIVEPDVKERILKLFYR
KKVCADDVKLTEEDLATSIPLSQAKEFGDVSVGDELDCELQLDEMSRGAINKLFLNLEYN
LQRSIEDQILQGFRAQLGKIVNGQVVGVDERGNTFVEIDSIRALLPQKNRIKGESFKVGD
TIRAVLKFVGINKNGLQVELSRTTPKFLEELLALEVPEIKDNEVMIFKSARIPGDRAKVA
VYSNNPRIDTIGCCVGVKGVRINAVSKELANENIDCVEYHSTLEIFIAKALTPAQILSVK
IQEQNIEQSERENMEGEKEKNERKKAIVLIKSDQKSKAIGKGGVNIRLASMLCDCDIELC
EIDTPNTGDSKADSNADSNTTTPSENTAQKSGLDALSSLFKN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagattttagatattattgatttaattgcgtatgacaaggggctagataatggc
gtggttttagagattgtcaaaaatggcttaatcaaaatcgcacaagaagagattaatccc
ctttatcactacattgttgagccagatgtaaaagagcggatattaaagcttttttaccgc
aaaaaagtctgtgctgatgatgtaaaactcacagaagaagatttagctacttcaatcccc
ttgtctcaagctaaggagtttggcgatgtgagtgtaggcgatgagctagattgtgaattg
cagcttgatgagatgagccgtggagcaatcaacaagctttttttgaatcttgaatacaat
ttgcaacgctccattgaagatcagattctacaaggctttcgcgcccaacttggcaaaatc
gtcaatgggcaggttgtgggtgttgatgagcgtggcaatacctttgtagaaatcgattct
atccgtgccctgctaccgcagaaaaatcgcataaagggcgagagtttcaaggttggcgat
accattcgtgcggtgctaaaatttgttggcattaacaaaaatgggctacaagtggagcta
tctcgcaccacgccaaaatttttagaagagcttttagcgttagaagtcccagagattaaa
gataatgaagtaatgatttttaaaagtgcgagaatccccggcgatagagcaaaggtagcg
gtatattccaataatcctagaattgatactatcggttgctgtgtgggtgtaaagggtgtg
cggataaatgcagtcagcaaagagctagcaaatgaaaatattgactgcgtagaatatcac
agcacactagagatatttatcgctaaagccttgacgcctgctcaaatcctaagtgtaaaa
atacaagagcaaaatatagagcaaagtgagcgtgaaaatatggagggcgaaaaagagaaa
aatgaaagaaaaaaggctatcgtgctgatcaaaagcgatcaaaaaagcaaggctatcggc
aaggggggtgtgaacatccgccttgcaagtatgctatgtgattgcgatattgaactatgc
gagattgacacgccaaatacgggggattccaaagcagattctaatgcggattctaatacc
acaactccaagtgaaaacacggcacaaaaaagcggactagacgcccttagctcactcttt
aaaaattag
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