Helicobacter cinaedi PAGU611: HCN_0180
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Entry
HCN_0180 CDS
T02034
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp02024
Quorum sensing
hcp03060
Protein export
hcp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HCN_0180 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HCN_0180 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HCN_0180 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hcp02044
]
HCN_0180 (ffh)
Enzymes [BR:
hcp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HCN_0180 (ffh)
Secretion system [BR:
hcp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HCN_0180 (ffh)
Eukaryotic Sec-SRP protein
HCN_0180 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
CbiA
SRP54_N
AAA_22
AAA_31
ArsA_ATPase
Fer4_NifH
AAA_30
ResIII
Zeta_toxin
NPHP3_N
nSTAND3
AAA_24
ATPase
AAA_33
APS_kinase
AAA_16
AAA_19
MipZ
ParA
6PF2K
AAA_14
CobA_CobO_BtuR
DUF460
MeaB
DO-GTPase1
SLFN-g3_helicase
Thymidylate_kin
DEXQc_Suv3
ABC_tran
AAA
ATPase_2
CLP1_P
MobB
DUF4230
KTI12
Fe-ADH
TraI_hel_assoc_N
AAA_17
Motif
Other DBs
NCBI-ProteinID:
BAM11506
LinkDB
All DBs
Position
complement(197456..198799)
Genome browser
AA seq
447 aa
AA seq
DB search
MFDTLTSSFKGIINKIRFADDEKSLQRACDDLKKTLLKNDVYHKATKQIIQEVSQRTKSN
GIGKQSFMNALQESLNEILKSKKSYGISFSPTPPSVILMMGLQGSGKTTSSAKLALYLKQ
KGKKVLLVACDLHRLAAIEQLSQLAASIEVDIFTPNQSSKPENAVQVAKEAKQKATNTHY
DVVIIDSAGRLSIDEALMQELLEIKDSINATECLYVADSLSGQDGIRSAQNFNEKIGIDG
VILSKFDSDSKGGIALSIAYQIGVPLKFIGSGEKVADFDVFVPERIISRLMGAGDIAGLA
EKTASVINQDEAKSIAKKIKKGQFGFEDFINQIENVKKLGSMSSIASMIPGLGGMASALK
DVDLDKSNEIKNIRAMVNSMTKKERENPDLLNGSRRKRIAQGSGLEVSDINRIIKQFDQA
AKLAKKLSQKGGMQELMSMMGNMRMPK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacacactcacaagctcatttaaaggcattattaacaaaatccgctttgctgat
gatgaaaaatcgcttcaaagggcgtgtgatgatctgaaaaagactttattaaaaaatgat
gtgtatcacaaagctacaaaacagattatccaagaagtgagccaacgcaccaaaagcaat
ggcataggcaaacaaagctttatgaatgcccttcaagaatctttaaatgagattctaaaa
tccaaaaaaagctatgggattagcttctcaccaacgccgcctagtgtgattttgatgatg
ggtttgcaaggaagcggtaaaacaacttcaagtgccaaactcgccctttatcttaaacaa
aaaggtaagaaagttttgcttgtggcgtgtgatttgcatagactcgcagccattgagcag
cttagtcaattagccgcaagtattgaagtggatattttcacaccaaatcaaagctcaaag
cctgaaaatgctgtgcaagtagccaaggaagccaagcaaaaagcaacaaacacacattat
gatgtggttatcatagatagtgcgggacgcttaagtattgatgaagctttaatgcaagag
cttttagaaattaaagattctattaacgccacagaatgcctgtatgtagccgattctcta
agcggacaagatggaatccgctccgcacaaaattttaatgaaaaaattggcattgatggg
gtgatcctttcaaaatttgatagcgatagcaaaggcgggattgccctatctatcgcctat
caaatcggcgttccgctgaagtttataggaagcggagagaaagtagcggattttgatgtg
tttgtgcctgaacgcattatctctcgtcttatgggagcgggggatattgcaggattagcg
gaaaaaaccgcaagtgtcatcaatcaagatgaagctaaaagcatagctaaaaaaatcaaa
aaagggcaatttggctttgaagattttattaatcaaattgaaaatgttaaaaagctaggc
tcaatgagttccattgcctcaatgattcccgggcttggcggaatggcaagtgcgttaaaa
gatgtggatttagacaaatcaaatgagattaaaaatatccgtgcaatggtaaattctatg
acaaaaaaagaaagagagaatcccgatttactcaatggctcaagacgcaagagaatagcc
caaggcagtggcttggaagtgagcgatataaatcgcattattaagcagtttgatcaagcg
gcaaaattagctaaaaaactttcacaaaagggcggtatgcaggagcttatgagtatgatg
ggcaatatgcgtatgccaaaataa
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