Helicobacter cinaedi PAGU611: HCN_0186
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Entry
HCN_0186 CDS
T02034
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp03420
Nucleotide excision repair
hcp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HCN_0186 (rep)
03430 Mismatch repair
HCN_0186 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcp03400
]
HCN_0186 (rep)
Enzymes [BR:
hcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCN_0186 (rep)
DNA repair and recombination proteins [BR:
hcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCN_0186 (rep)
MMR (mismatch excision repair)
Other MMR factors
HCN_0186 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAM11512
LinkDB
All DBs
Position
204423..206453
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AA seq
676 aa
AA seq
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MPLSNLNAEQLAAATAPSGHNLIIASAGTGKTSTIVGRIAYLLQQGFKPKDILLLTFTNK
ASSEMIERVGKIFGSSLAKEIESGTFHAVAYRYLRQMKNIHLKQPKELQMLFKSLYEKRI
FSQDSIKPYSAQYLYEIYSLFVNAAYKGGFGAWIVDRNPQQEPYIAIYEDVMEEFKALKH
THHYADYNDLLLLYRESLLELSSPPFMEVLCDEYQDTNPLQDSILDALRPQSLFCVGDYD
QSIYAFNGADISIISGFGEKYADSKVFTLSKNYRSSKHILELANKVIEKNERVYPKRLEV
IKQGEFAPPKLVWYDELFLQYQGIAKRIALSNIPYENTAIIFRNNSSADGIEASLRELNI
PSKRKGSVSFFDTKEVGLILDICSLTHNPRDMMAHIHTLSYGKGIGNSIAKDIYEALFIL
GEGDCHRGMFSPKSDVKAYQQRAKNTQLGLFDDFFALESQGRFNEYITGGFASHPLLQHP
KIQKEGAIFLSDFYEMLDSIRHIKEPKRLIERIVNAKFFTDIMQNLAKNRSKTKEGSIDS
ARLEQALESIKRKCSLLLDLAKNHNDLGKFLNAMILGSSEASEGSGVNLLSIHASKGLEF
QNVYVVDLMDGRFPNRKLISKGGSIEEERRLFYVAITRAKENLILSFAKKDNMKNIDYAP
SIFLYEGELLSKDSVV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccactctccaaccttaacgccgagcagttagccgccgctactgctccaagcggacat
aatcttattatcgcttcggctgggacgggcaagacttccacgattgtggggcgtatagcc
tatcttttgcagcagggctttaagcctaaagatattttattgcttacctttacaaacaaa
gcaagtagtgagatgattgagcgagtggggaaaatctttggctctagccttgctaaagag
atagaatctggcacatttcacgccgtggcgtatcgctatttgcgacagatgaaaaatatc
catcttaaacagcctaaagaattgcaaatgctctttaaaagtctgtatgaaaaacgcatt
tttagccaagattccattaagccctattccgcacagtatttatatgaaatctattcgctt
tttgtcaatgctgcgtataagggtggctttggggcgtggatagtagataggaatccgcag
caagagccatatattgctatttatgaagatgtaatggaagagttcaaggcattaaagcac
acacatcattatgcggattacaatgacttgcttttattgtatcgtgaatctttgctagag
cttagctcaccgccatttatggaagtgctatgcgatgagtatcaagacactaatccactg
caagattctatccttgatgcacttagaccccaaagtttattttgcgtgggggattatgac
caaagcatttatgcgtttaatggggcggatattagcataatcagcggctttggggaaaag
tatgcagattcaaaagtttttactttaagcaaaaattaccgctcaagtaagcatatcctt
gaacttgctaataaagtgatagagaaaaatgaacgggtatatcccaaaaggctagaagtg
attaaacaaggtgagtttgccccaccaaagcttgtgtggtatgatgagctgtttttgcag
tatcagggcattgccaaacgcatagctttaagcaacataccttatgaaaataccgctatt
atttttcgcaataattcaagtgccgatgggattgaggcgagtttgcgagagctaaatatc
ccttcaaaacgcaaggggagtgtgagcttttttgacacaaaggaagtgggcctgatactt
gatatttgctcccttacgcataatccacgcgatatgatggcacatattcatacgctgagc
tatggcaaaggcataggcaatagcattgctaaggatatttatgaggcgttgtttatctta
ggtgagggggattgccataggggtatgttttcgccaaagagtgatgtaaaagcctatcag
caaagggcaaaaaatacacagcttggactttttgatgatttttttgctttagaatctcaa
ggtaggtttaatgaatatattacagggggctttgcttcacacccgcttttgcaacaccca
aagattcaaaaagagggggcgatatttttaagtgatttttatgaaatgctagattctata
aggcatattaaagagccaaaaaggctgattgagcgaattgtaaatgcgaagttttttact
gacattatgcaaaatctagctaaaaatcgctctaagacaaaagagggcagtatagattct
gcaaggcttgaacaggctttagaatctatcaaacgcaaatgcagccttttgcttgatttg
gcaaaaaatcacaatgatttggggaagtttttaaacgcgatgattctaggctcaagtgaa
gcaagtgagggtagtggggtaaatctattaagcattcacgcaagtaaggggctagagttt
caaaatgtgtatgtggtggatttaatggatgggcgatttccaaatcgcaaactcataagc
aagggcggaagcatagaagaggagcgacggctcttttatgtagccatcacgcgtgcaaaa
gaaaatcttatattatcctttgctaaaaaggataatatgaaaaacatcgactatgcccca
tcaatctttttatacgagggcgaattgttaagcaaagatagtgtggtttag
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