Helicobacter cinaedi PAGU611: HCN_0191
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Entry
HCN_0191 CDS
T02034
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCN_0191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcp03400
]
HCN_0191
Enzymes [BR:
hcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HCN_0191
DNA repair and recombination proteins [BR:
hcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HCN_0191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAM11517
LinkDB
All DBs
Position
complement(210628..211254)
Genome browser
AA seq
208 aa
AA seq
DB search
MKAQILKLLQLKQLYKRQACGEKYANALFAPKSNAPIGQDINTLIKNCSLCNRIKHCKAP
NIGLINQNASVCFISEIPLVSESQAFVQNKSAIMLQNIISNVFKLSLSQVSILSLIKCDP
LNPHFEKSELLSCKPYILTQLQSLAPKLCVLLGDVVSEHILGSHLEHSRILWHNNRKFLV
TYALNELVRNPSLKAQAHNDFLIAKGQL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacagattctaaaacttcttcaattaaagcaactctacaaacgccaagcttgt
ggggaaaaatatgcaaatgctctttttgccccaaaatccaacgcccccatagggcaagac
ataaacacccttatcaaaaattgctcactttgcaatcgcattaaacattgtaaagcccca
aatatcgggcttataaatcaaaatgcaagtgtgtgctttatcagtgaaatccctcttgta
agtgaatctcaagcatttgtgcaaaataaaagtgcgataatgttacaaaacatcattagc
aatgttttcaagctctctctttcacaagtctctatcctttcactcattaaatgcgatccg
cttaatccacattttgaaaaaagtgagcttcttagctgtaagccctatatactcacacag
cttcaaagccttgcgccaaagctctgtgtgcttttaggcgatgtggtcagtgagcatatt
ttgggcagtcatttggaacatagtagaatcttatggcacaataacaggaaatttttagtt
acttatgcactcaatgagcttgtgcggaatccctcacttaaagcacaggcacataatgac
tttttaattgcgaaaggacaattatga
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