KEGG   Helicobacter cinaedi PAGU611: HCN_0289
Entry
HCN_0289          CDS       T02034                                 
Name
(GenBank) virulence-associated protein VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
hcp  Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:hcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hcp03016]
    HCN_0289
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcp02048]
    HCN_0289
Transfer RNA biogenesis [BR:hcp03016]
 Prokaryotic type
  tRNA degradation factors
   HCN_0289
Prokaryotic defense system [BR:hcp02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    HCN_0289
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: BAM11605
LinkDB
Position
complement(292032..292433)
AA seq 133 aa
MAKIMLDTNICIYIINNKPQYIKDRFLQYRIGDIAISSISVSELYFGVEKSQYKEANTNA
LNTFLTHLEVIDFTHKEALTYAKIRADLEYKKSLIGAIDMLISAVALANDLTLITDNTKE
FQRVKNLKIENWV
NT seq 402 nt   +upstreamnt  +downstreamnt
atggcaaaaataatgcttgatacaaatatatgtatttatattatcaataataaaccgcaa
tatattaaagatagatttttacaatacagaataggcgatattgctataagctctatcagt
gtatctgaattatactttggtgtagaaaaatctcaatataaagaagcaaatacaaatgct
cttaatacattcctaacacaccttgaagtaatagatttcacacataaagaagcacttaca
tatgcaaaaattagagcagatttagaatacaaaaagtctctcataggtgctatagatatg
cttatttcagcggtagctcttgcaaatgatttaacacttattacagataacacaaaagaa
tttcaaagagttaagaatctaaaaatagaaaattgggtgtga

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